Protein–RNA interactions for Protein: A4D1U4

LCHN, Protein LCHN, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCHNA4D1U4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LCHNA4D1U4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.85■□□□□ 0.61
LCHNA4D1U4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
LCHNA4D1U4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
LCHNA4D1U4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.85■□□□□ 0.61
LCHNA4D1U4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
LCHNA4D1U4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LCHNA4D1U4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LCHNA4D1U4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.85■□□□□ 0.61
LCHNA4D1U4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.85■□□□□ 0.61
LCHNA4D1U4 PAWRP1-201ENST00000451083 565 ntBASIC18.85■□□□□ 0.61
LCHNA4D1U4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.85■□□□□ 0.61
LCHNA4D1U4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LCHNA4D1U4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.85■□□□□ 0.61
LCHNA4D1U4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.85■□□□□ 0.61
LCHNA4D1U4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.85■□□□□ 0.61
LCHNA4D1U4 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.85■□□□□ 0.61
LCHNA4D1U4 AC105339.1-204ENST00000636249 355 ntBASIC18.85■□□□□ 0.61
LCHNA4D1U4 AL138781.2-201ENST00000617896 1843 ntBASIC18.85■□□□□ 0.61
LCHNA4D1U4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.85■□□□□ 0.61
LCHNA4D1U4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LCHNA4D1U4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LCHNA4D1U4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.85■□□□□ 0.61
LCHNA4D1U4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.85■□□□□ 0.61
LCHNA4D1U4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LCHNA4D1U4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
LCHNA4D1U4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
LCHNA4D1U4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.84■□□□□ 0.61
LCHNA4D1U4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LCHNA4D1U4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
LCHNA4D1U4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.84■□□□□ 0.61
LCHNA4D1U4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LCHNA4D1U4 PHGDH-209ENST00000641074 1780 ntBASIC18.84■□□□□ 0.61
LCHNA4D1U4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LCHNA4D1U4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LCHNA4D1U4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LCHNA4D1U4 AC003669.1-201ENST00000334569 611 ntBASIC18.84■□□□□ 0.61
LCHNA4D1U4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.84■□□□□ 0.61
LCHNA4D1U4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.84■□□□□ 0.61
LCHNA4D1U4 AC092474.2-201ENST00000424288 719 ntBASIC18.84■□□□□ 0.61
LCHNA4D1U4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.84■□□□□ 0.61
LCHNA4D1U4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.84■□□□□ 0.61
LCHNA4D1U4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LCHNA4D1U4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.84■□□□□ 0.61
LCHNA4D1U4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.84■□□□□ 0.61
LCHNA4D1U4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LCHNA4D1U4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.84■□□□□ 0.61
LCHNA4D1U4 AC138761.1-201ENST00000584393 385 ntBASIC18.84■□□□□ 0.61
LCHNA4D1U4 AC019129.2-201ENST00000609837 1235 ntBASIC18.84■□□□□ 0.61
LCHNA4D1U4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.84■□□□□ 0.61
LCHNA4D1U4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
LCHNA4D1U4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
LCHNA4D1U4 AC093010.1-201ENST00000473625 1624 ntBASIC18.84■□□□□ 0.61
LCHNA4D1U4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.84■□□□□ 0.61
LCHNA4D1U4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LCHNA4D1U4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LCHNA4D1U4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LCHNA4D1U4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
LCHNA4D1U4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LCHNA4D1U4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
LCHNA4D1U4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LCHNA4D1U4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LCHNA4D1U4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LCHNA4D1U4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LCHNA4D1U4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LCHNA4D1U4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
LCHNA4D1U4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LCHNA4D1U4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LCHNA4D1U4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.83■□□□□ 0.61
LCHNA4D1U4 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.83■□□□□ 0.61
LCHNA4D1U4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
LCHNA4D1U4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
LCHNA4D1U4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
LCHNA4D1U4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LCHNA4D1U4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.83■□□□□ 0.6
LCHNA4D1U4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.83■□□□□ 0.6
LCHNA4D1U4 HLA-J-203ENST00000494367 1087 ntBASIC18.83■□□□□ 0.6
LCHNA4D1U4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.83■□□□□ 0.6
LCHNA4D1U4 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LCHNA4D1U4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.83■□□□□ 0.6
LCHNA4D1U4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.83■□□□□ 0.6
LCHNA4D1U4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.83■□□□□ 0.6
LCHNA4D1U4 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.83■□□□□ 0.6
LCHNA4D1U4 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.83■□□□□ 0.6
LCHNA4D1U4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.83■□□□□ 0.6
LCHNA4D1U4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.83■□□□□ 0.6
LCHNA4D1U4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
LCHNA4D1U4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LCHNA4D1U4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LCHNA4D1U4 AIRN-201ENST00000601203 4374 ntBASIC18.83■□□□□ 0.6
LCHNA4D1U4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
LCHNA4D1U4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LCHNA4D1U4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LCHNA4D1U4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LCHNA4D1U4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LCHNA4D1U4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LCHNA4D1U4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LCHNA4D1U4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LCHNA4D1U4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LCHNA4D1U4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms