Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM28A0A1B0GU29 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.91■□□□□ 0.62
SMIM28A0A1B0GU29 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.91■□□□□ 0.62
SMIM28A0A1B0GU29 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SMIM28A0A1B0GU29 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SMIM28A0A1B0GU29 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM28A0A1B0GU29 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM28A0A1B0GU29 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM28A0A1B0GU29 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM28A0A1B0GU29 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.9■□□□□ 0.62
SMIM28A0A1B0GU29 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMIM28A0A1B0GU29 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.9■□□□□ 0.62
SMIM28A0A1B0GU29 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMIM28A0A1B0GU29 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMIM28A0A1B0GU29 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMIM28A0A1B0GU29 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMIM28A0A1B0GU29 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMIM28A0A1B0GU29 MIR574-201ENST00000385209 96 ntBASIC18.9■□□□□ 0.62
SMIM28A0A1B0GU29 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
SMIM28A0A1B0GU29 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SMIM28A0A1B0GU29 AC098831.1-202ENST00000438821 336 ntBASIC18.9■□□□□ 0.62
SMIM28A0A1B0GU29 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.9■□□□□ 0.62
SMIM28A0A1B0GU29 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SMIM28A0A1B0GU29 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SMIM28A0A1B0GU29 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.9■□□□□ 0.62
SMIM28A0A1B0GU29 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.9■□□□□ 0.62
SMIM28A0A1B0GU29 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.9■□□□□ 0.62
SMIM28A0A1B0GU29 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
SMIM28A0A1B0GU29 AL589182.2-201ENST00000619332 1049 ntBASIC18.9■□□□□ 0.62
SMIM28A0A1B0GU29 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMIM28A0A1B0GU29 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SMIM28A0A1B0GU29 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.9■□□□□ 0.62
SMIM28A0A1B0GU29 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
SMIM28A0A1B0GU29 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMIM28A0A1B0GU29 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.9■□□□□ 0.62
SMIM28A0A1B0GU29 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.9■□□□□ 0.62
SMIM28A0A1B0GU29 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMIM28A0A1B0GU29 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMIM28A0A1B0GU29 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMIM28A0A1B0GU29 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMIM28A0A1B0GU29 AL390961.4-201ENST00000623958 2535 ntBASIC18.9■□□□□ 0.62
SMIM28A0A1B0GU29 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
SMIM28A0A1B0GU29 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SMIM28A0A1B0GU29 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SMIM28A0A1B0GU29 AC009336.1-201ENST00000608941 1553 ntBASIC18.89■□□□□ 0.62
SMIM28A0A1B0GU29 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SMIM28A0A1B0GU29 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SMIM28A0A1B0GU29 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMIM28A0A1B0GU29 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SMIM28A0A1B0GU29 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
SMIM28A0A1B0GU29 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SMIM28A0A1B0GU29 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMIM28A0A1B0GU29 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMIM28A0A1B0GU29 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SMIM28A0A1B0GU29 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMIM28A0A1B0GU29 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMIM28A0A1B0GU29 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.89■□□□□ 0.61
SMIM28A0A1B0GU29 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SMIM28A0A1B0GU29 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMIM28A0A1B0GU29 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SMIM28A0A1B0GU29 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMIM28A0A1B0GU29 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.89■□□□□ 0.61
SMIM28A0A1B0GU29 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.89■□□□□ 0.61
SMIM28A0A1B0GU29 MYCLP1-201ENST00000372451 1075 ntBASIC18.89■□□□□ 0.61
SMIM28A0A1B0GU29 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.89■□□□□ 0.61
SMIM28A0A1B0GU29 KRT18P27-201ENST00000427733 1299 ntBASIC18.89■□□□□ 0.61
SMIM28A0A1B0GU29 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.89■□□□□ 0.61
SMIM28A0A1B0GU29 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SMIM28A0A1B0GU29 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.89■□□□□ 0.61
SMIM28A0A1B0GU29 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.89■□□□□ 0.61
SMIM28A0A1B0GU29 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMIM28A0A1B0GU29 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SMIM28A0A1B0GU29 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.89■□□□□ 0.61
SMIM28A0A1B0GU29 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SMIM28A0A1B0GU29 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMIM28A0A1B0GU29 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMIM28A0A1B0GU29 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.89■□□□□ 0.61
SMIM28A0A1B0GU29 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SMIM28A0A1B0GU29 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.89■□□□□ 0.61
SMIM28A0A1B0GU29 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.89■□□□□ 0.61
SMIM28A0A1B0GU29 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMIM28A0A1B0GU29 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.89■□□□□ 0.61
SMIM28A0A1B0GU29 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SMIM28A0A1B0GU29 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SMIM28A0A1B0GU29 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMIM28A0A1B0GU29 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SMIM28A0A1B0GU29 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
SMIM28A0A1B0GU29 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.88■□□□□ 0.61
SMIM28A0A1B0GU29 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.88■□□□□ 0.61
SMIM28A0A1B0GU29 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.88■□□□□ 0.61
SMIM28A0A1B0GU29 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMIM28A0A1B0GU29 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMIM28A0A1B0GU29 AC073621.1-201ENST00000392730 636 ntBASIC18.88■□□□□ 0.61
SMIM28A0A1B0GU29 SLC25A6P5-201ENST00000435663 894 ntBASIC18.88■□□□□ 0.61
SMIM28A0A1B0GU29 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.88■□□□□ 0.61
SMIM28A0A1B0GU29 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.88■□□□□ 0.61
SMIM28A0A1B0GU29 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.88■□□□□ 0.61
SMIM28A0A1B0GU29 AC145285.3-201ENST00000564603 959 ntBASIC18.88■□□□□ 0.61
SMIM28A0A1B0GU29 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.88■□□□□ 0.61
SMIM28A0A1B0GU29 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms