Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 AC011840.4-201ENST00000578471 627 ntBASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 TSSC2-201ENST00000450217 709 ntBASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 AL445228.2-201ENST00000605589 952 ntBASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.6■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.59■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 AP001094.4-201ENST00000579008 2176 ntBASIC15.59■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.59■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.59■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.59■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.59■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.59■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 AC019129.2-201ENST00000609837 1235 ntBASIC15.59■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 AL358472.4-201ENST00000633140 710 ntBASIC15.59■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.59■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.59■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.59■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms