Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCN10AQ9Y5Y9 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SCN10AQ9Y5Y9 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SCN10AQ9Y5Y9 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCN10AQ9Y5Y9 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SCN10AQ9Y5Y9 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCN10AQ9Y5Y9 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SCN10AQ9Y5Y9 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCN10AQ9Y5Y9 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.2■□□□□ 0.66
SCN10AQ9Y5Y9 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.2■□□□□ 0.66
SCN10AQ9Y5Y9 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SCN10AQ9Y5Y9 AC006116.8-202ENST00000587620 1550 ntBASIC19.2■□□□□ 0.66
SCN10AQ9Y5Y9 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCN10AQ9Y5Y9 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.2■□□□□ 0.66
SCN10AQ9Y5Y9 AP000974.1-201ENST00000623909 2387 ntBASIC19.2■□□□□ 0.66
SCN10AQ9Y5Y9 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCN10AQ9Y5Y9 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.2■□□□□ 0.66
SCN10AQ9Y5Y9 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.2■□□□□ 0.66
SCN10AQ9Y5Y9 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.2■□□□□ 0.66
SCN10AQ9Y5Y9 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SCN10AQ9Y5Y9 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.2■□□□□ 0.66
SCN10AQ9Y5Y9 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SCN10AQ9Y5Y9 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.2■□□□□ 0.66
SCN10AQ9Y5Y9 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.2■□□□□ 0.66
SCN10AQ9Y5Y9 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.2■□□□□ 0.66
SCN10AQ9Y5Y9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.2■□□□□ 0.66
SCN10AQ9Y5Y9 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.2■□□□□ 0.66
SCN10AQ9Y5Y9 AC092919.2-201ENST00000623631 1645 ntBASIC19.2■□□□□ 0.66
SCN10AQ9Y5Y9 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCN10AQ9Y5Y9 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCN10AQ9Y5Y9 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.2■□□□□ 0.66
SCN10AQ9Y5Y9 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SCN10AQ9Y5Y9 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
SCN10AQ9Y5Y9 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN10AQ9Y5Y9 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN10AQ9Y5Y9 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.19■□□□□ 0.66
SCN10AQ9Y5Y9 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SCN10AQ9Y5Y9 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
SCN10AQ9Y5Y9 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN10AQ9Y5Y9 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN10AQ9Y5Y9 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.19■□□□□ 0.66
SCN10AQ9Y5Y9 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.19■□□□□ 0.66
SCN10AQ9Y5Y9 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.19■□□□□ 0.66
SCN10AQ9Y5Y9 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.19■□□□□ 0.66
SCN10AQ9Y5Y9 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.19■□□□□ 0.66
SCN10AQ9Y5Y9 ACTL9-202ENST00000612068 1252 ntBASIC19.19■□□□□ 0.66
SCN10AQ9Y5Y9 AC093512.1-201ENST00000617969 520 ntBASIC19.19■□□□□ 0.66
SCN10AQ9Y5Y9 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN10AQ9Y5Y9 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.19■□□□□ 0.66
SCN10AQ9Y5Y9 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SCN10AQ9Y5Y9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SCN10AQ9Y5Y9 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN10AQ9Y5Y9 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN10AQ9Y5Y9 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN10AQ9Y5Y9 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN10AQ9Y5Y9 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SCN10AQ9Y5Y9 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.19■□□□□ 0.66
SCN10AQ9Y5Y9 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.19■□□□□ 0.66
SCN10AQ9Y5Y9 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SCN10AQ9Y5Y9 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.19■□□□□ 0.66
SCN10AQ9Y5Y9 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SCN10AQ9Y5Y9 AC099522.2-201ENST00000607001 744 ntBASIC19.19■□□□□ 0.66
SCN10AQ9Y5Y9 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.19■□□□□ 0.66
SCN10AQ9Y5Y9 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.19■□□□□ 0.66
SCN10AQ9Y5Y9 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN10AQ9Y5Y9 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.19■□□□□ 0.66
SCN10AQ9Y5Y9 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.19■□□□□ 0.66
SCN10AQ9Y5Y9 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN10AQ9Y5Y9 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SCN10AQ9Y5Y9 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCN10AQ9Y5Y9 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCN10AQ9Y5Y9 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCN10AQ9Y5Y9 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.18■□□□□ 0.66
SCN10AQ9Y5Y9 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SCN10AQ9Y5Y9 KRT18P55-202ENST00000578578 1546 ntBASIC19.18■□□□□ 0.66
SCN10AQ9Y5Y9 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCN10AQ9Y5Y9 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCN10AQ9Y5Y9 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCN10AQ9Y5Y9 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCN10AQ9Y5Y9 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCN10AQ9Y5Y9 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCN10AQ9Y5Y9 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.18■□□□□ 0.66
SCN10AQ9Y5Y9 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCN10AQ9Y5Y9 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.18■□□□□ 0.66
SCN10AQ9Y5Y9 AC074386.1-202ENST00000463561 864 ntBASIC19.18■□□□□ 0.66
SCN10AQ9Y5Y9 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCN10AQ9Y5Y9 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.18■□□□□ 0.66
SCN10AQ9Y5Y9 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCN10AQ9Y5Y9 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCN10AQ9Y5Y9 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SCN10AQ9Y5Y9 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCN10AQ9Y5Y9 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SCN10AQ9Y5Y9 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCN10AQ9Y5Y9 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.18■□□□□ 0.66
SCN10AQ9Y5Y9 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.18■□□□□ 0.66
SCN10AQ9Y5Y9 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCN10AQ9Y5Y9 AL135999.2-201ENST00000622438 1686 ntBASIC19.17■□□□□ 0.66
SCN10AQ9Y5Y9 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.17■□□□□ 0.66
SCN10AQ9Y5Y9 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN10AQ9Y5Y9 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms