Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 AL356309.3-201ENST00000624132 1934 ntBASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 AL671277.2-201ENST00000458060 996 ntBASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 AC112698.1-201ENST00000510299 916 ntBASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 AC012183.1-201ENST00000625197 499 ntBASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 AC009949.1-201ENST00000623048 1830 ntBASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA11Q9Y5H2 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PCDHGA11Q9Y5H2 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGA11Q9Y5H2 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGA11Q9Y5H2 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PCDHGA11Q9Y5H2 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PCDHGA11Q9Y5H2 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA11Q9Y5H2 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA11Q9Y5H2 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA11Q9Y5H2 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGA11Q9Y5H2 KRT8P47-201ENST00000604727 1398 ntBASIC17.18■□□□□ 0.34
PCDHGA11Q9Y5H2 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA11Q9Y5H2 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGA11Q9Y5H2 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGA11Q9Y5H2 AC141586.5-201ENST00000624546 2050 ntBASIC17.18■□□□□ 0.34
PCDHGA11Q9Y5H2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA11Q9Y5H2 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA11Q9Y5H2 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA11Q9Y5H2 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA11Q9Y5H2 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA11Q9Y5H2 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA11Q9Y5H2 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDHGA11Q9Y5H2 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGA11Q9Y5H2 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA11Q9Y5H2 AL390719.2-201ENST00000606993 987 ntBASIC17.18■□□□□ 0.34
PCDHGA11Q9Y5H2 AC083849.1-201ENST00000615227 514 ntBASIC17.18■□□□□ 0.34
PCDHGA11Q9Y5H2 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGA11Q9Y5H2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGA11Q9Y5H2 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA11Q9Y5H2 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA11Q9Y5H2 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA11Q9Y5H2 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGA11Q9Y5H2 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA11Q9Y5H2 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA11Q9Y5H2 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA11Q9Y5H2 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA11Q9Y5H2 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA11Q9Y5H2 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PCDHGA11Q9Y5H2 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA11Q9Y5H2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA11Q9Y5H2 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA11Q9Y5H2 AD000864.1-201ENST00000624076 2295 ntBASIC17.17■□□□□ 0.34
PCDHGA11Q9Y5H2 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA11Q9Y5H2 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA11Q9Y5H2 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA11Q9Y5H2 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA11Q9Y5H2 AL355312.1-201ENST00000407115 2176 ntBASIC17.17■□□□□ 0.34
PCDHGA11Q9Y5H2 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.17■□□□□ 0.34
PCDHGA11Q9Y5H2 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDHGA11Q9Y5H2 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA11Q9Y5H2 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHGA11Q9Y5H2 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHGA11Q9Y5H2 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHGA11Q9Y5H2 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHGA11Q9Y5H2 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDHGA11Q9Y5H2 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA11Q9Y5H2 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA11Q9Y5H2 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA11Q9Y5H2 Z83836.1-201ENST00000624605 1642 ntBASIC17.17■□□□□ 0.34
PCDHGA11Q9Y5H2 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA11Q9Y5H2 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
PCDHGA11Q9Y5H2 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
PCDHGA11Q9Y5H2 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms