Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB3Q9Y5E6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB3Q9Y5E6 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHB3Q9Y5E6 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB3Q9Y5E6 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB3Q9Y5E6 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHB3Q9Y5E6 FOSL1P1-201ENST00000511041 816 ntBASIC17.36■□□□□ 0.37
PCDHB3Q9Y5E6 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHB3Q9Y5E6 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDHB3Q9Y5E6 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PCDHB3Q9Y5E6 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB3Q9Y5E6 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PCDHB3Q9Y5E6 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB3Q9Y5E6 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB3Q9Y5E6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PCDHB3Q9Y5E6 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB3Q9Y5E6 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PCDHB3Q9Y5E6 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 RN7SL606P-201ENST00000472779 293 ntBASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 AC113404.2-201ENST00000507884 177 ntBASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 Z69720.1-201ENST00000601483 472 ntBASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 AL592071.1-201ENST00000611956 408 ntBASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 PHGDH-209ENST00000641074 1780 ntBASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB3Q9Y5E6 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 EMBP1-201ENST00000458200 901 ntBASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 AC006116.8-202ENST00000587620 1550 ntBASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 AL732292.2-201ENST00000609649 430 ntBASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
PCDHB3Q9Y5E6 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHB3Q9Y5E6 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHB3Q9Y5E6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHB3Q9Y5E6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHB3Q9Y5E6 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
PCDHB3Q9Y5E6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms