Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
YIPF1Q9Y548 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
YIPF1Q9Y548 AC009113.1-201ENST00000570267 2443 ntBASIC18.42■□□□□ 0.54
YIPF1Q9Y548 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
YIPF1Q9Y548 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
YIPF1Q9Y548 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
YIPF1Q9Y548 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.42■□□□□ 0.54
YIPF1Q9Y548 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.42■□□□□ 0.54
YIPF1Q9Y548 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
YIPF1Q9Y548 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.41■□□□□ 0.54
YIPF1Q9Y548 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
YIPF1Q9Y548 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
YIPF1Q9Y548 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.41■□□□□ 0.54
YIPF1Q9Y548 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
YIPF1Q9Y548 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
YIPF1Q9Y548 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.41■□□□□ 0.54
YIPF1Q9Y548 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
YIPF1Q9Y548 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
YIPF1Q9Y548 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.41■□□□□ 0.54
YIPF1Q9Y548 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
YIPF1Q9Y548 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.41■□□□□ 0.54
YIPF1Q9Y548 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.41■□□□□ 0.54
YIPF1Q9Y548 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
YIPF1Q9Y548 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
YIPF1Q9Y548 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
YIPF1Q9Y548 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
YIPF1Q9Y548 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.41■□□□□ 0.54
YIPF1Q9Y548 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.41■□□□□ 0.54
YIPF1Q9Y548 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
YIPF1Q9Y548 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
YIPF1Q9Y548 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
YIPF1Q9Y548 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.41■□□□□ 0.54
YIPF1Q9Y548 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
YIPF1Q9Y548 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
YIPF1Q9Y548 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
YIPF1Q9Y548 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
YIPF1Q9Y548 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.4■□□□□ 0.54
YIPF1Q9Y548 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
YIPF1Q9Y548 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
YIPF1Q9Y548 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
YIPF1Q9Y548 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.4■□□□□ 0.54
YIPF1Q9Y548 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
YIPF1Q9Y548 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.4■□□□□ 0.54
YIPF1Q9Y548 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
YIPF1Q9Y548 AC108073.2-201ENST00000464002 357 ntBASIC18.4■□□□□ 0.54
YIPF1Q9Y548 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.4■□□□□ 0.54
YIPF1Q9Y548 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
YIPF1Q9Y548 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.4■□□□□ 0.54
YIPF1Q9Y548 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.4■□□□□ 0.54
YIPF1Q9Y548 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.4■□□□□ 0.54
YIPF1Q9Y548 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.4■□□□□ 0.54
YIPF1Q9Y548 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
YIPF1Q9Y548 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
YIPF1Q9Y548 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
YIPF1Q9Y548 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
YIPF1Q9Y548 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
YIPF1Q9Y548 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
YIPF1Q9Y548 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.39■□□□□ 0.54
YIPF1Q9Y548 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
YIPF1Q9Y548 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
YIPF1Q9Y548 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
YIPF1Q9Y548 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.39■□□□□ 0.53
YIPF1Q9Y548 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
YIPF1Q9Y548 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
YIPF1Q9Y548 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
YIPF1Q9Y548 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
YIPF1Q9Y548 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
YIPF1Q9Y548 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
YIPF1Q9Y548 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
YIPF1Q9Y548 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.39■□□□□ 0.53
YIPF1Q9Y548 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
YIPF1Q9Y548 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
YIPF1Q9Y548 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.39■□□□□ 0.53
YIPF1Q9Y548 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
YIPF1Q9Y548 YBX2P1-201ENST00000394192 760 ntBASIC18.39■□□□□ 0.53
YIPF1Q9Y548 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
YIPF1Q9Y548 RPS15P9-201ENST00000494093 319 ntBASIC18.39■□□□□ 0.53
YIPF1Q9Y548 AC010327.4-202ENST00000591484 748 ntBASIC18.39■□□□□ 0.53
YIPF1Q9Y548 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.39■□□□□ 0.53
YIPF1Q9Y548 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.39■□□□□ 0.53
YIPF1Q9Y548 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
YIPF1Q9Y548 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
YIPF1Q9Y548 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
YIPF1Q9Y548 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
YIPF1Q9Y548 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
YIPF1Q9Y548 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.39■□□□□ 0.53
YIPF1Q9Y548 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.39■□□□□ 0.53
YIPF1Q9Y548 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
YIPF1Q9Y548 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
YIPF1Q9Y548 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
YIPF1Q9Y548 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
YIPF1Q9Y548 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
YIPF1Q9Y548 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.38■□□□□ 0.53
YIPF1Q9Y548 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
YIPF1Q9Y548 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
YIPF1Q9Y548 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
YIPF1Q9Y548 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
YIPF1Q9Y548 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.38■□□□□ 0.53
YIPF1Q9Y548 MYCLP1-201ENST00000372451 1075 ntBASIC18.38■□□□□ 0.53
YIPF1Q9Y548 UPF3AP3-201ENST00000420996 769 ntBASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms