Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
FNDC3AQ9Y2H6 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FNDC3AQ9Y2H6 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
FNDC3AQ9Y2H6 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.11■□□□□ 0.49
FNDC3AQ9Y2H6 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FNDC3AQ9Y2H6 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.11■□□□□ 0.49
FNDC3AQ9Y2H6 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.11■□□□□ 0.49
FNDC3AQ9Y2H6 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FNDC3AQ9Y2H6 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
FNDC3AQ9Y2H6 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.11■□□□□ 0.49
FNDC3AQ9Y2H6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
FNDC3AQ9Y2H6 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.11■□□□□ 0.49
FNDC3AQ9Y2H6 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.11■□□□□ 0.49
FNDC3AQ9Y2H6 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
FNDC3AQ9Y2H6 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FNDC3AQ9Y2H6 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FNDC3AQ9Y2H6 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FNDC3AQ9Y2H6 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
FNDC3AQ9Y2H6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
FNDC3AQ9Y2H6 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FNDC3AQ9Y2H6 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.11■□□□□ 0.49
FNDC3AQ9Y2H6 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FNDC3AQ9Y2H6 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.11■□□□□ 0.49
FNDC3AQ9Y2H6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
FNDC3AQ9Y2H6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.11■□□□□ 0.49
FNDC3AQ9Y2H6 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.11■□□□□ 0.49
FNDC3AQ9Y2H6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.11■□□□□ 0.49
FNDC3AQ9Y2H6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
FNDC3AQ9Y2H6 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 VENTXP7-201ENST00000475503 772 ntBASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 AF238378.1-201ENST00000526806 358 ntBASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 TP73-AS1-207ENST00000624167 988 ntBASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.1■□□□□ 0.49
FNDC3AQ9Y2H6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms