Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.96■□□□□ 0.63
UBQLN1Q9UMX0 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBQLN1Q9UMX0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBQLN1Q9UMX0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBQLN1Q9UMX0 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
UBQLN1Q9UMX0 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.96■□□□□ 0.63
UBQLN1Q9UMX0 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBQLN1Q9UMX0 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBQLN1Q9UMX0 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBQLN1Q9UMX0 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
UBQLN1Q9UMX0 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBQLN1Q9UMX0 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 KLF4P1-201ENST00000412782 1185 ntBASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 BX005266.1-201ENST00000473402 457 ntBASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 AC079776.4-201ENST00000511039 504 ntBASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 STK25P1-201ENST00000585406 838 ntBASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 MTDHP4-201ENST00000600287 670 ntBASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 AC025062.2-201ENST00000605477 670 ntBASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 AL022326.1-202ENST00000641533 845 ntBASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.95■□□□□ 0.62
UBQLN1Q9UMX0 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 RPS2P28-201ENST00000314255 741 ntBASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 MYCLP1-201ENST00000372451 1075 ntBASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 PRYP5-201ENST00000451909 266 ntBASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.94■□□□□ 0.62
UBQLN1Q9UMX0 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.93■□□□□ 0.62
UBQLN1Q9UMX0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN1Q9UMX0 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.93■□□□□ 0.62
UBQLN1Q9UMX0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN1Q9UMX0 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN1Q9UMX0 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.93■□□□□ 0.62
UBQLN1Q9UMX0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN1Q9UMX0 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN1Q9UMX0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN1Q9UMX0 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN1Q9UMX0 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN1Q9UMX0 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN1Q9UMX0 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN1Q9UMX0 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms