Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GTF3C4Q9UKN8 LINC01711-201ENST00000598340 967 ntBASIC19.05■□□□□ 0.64
GTF3C4Q9UKN8 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.05■□□□□ 0.64
GTF3C4Q9UKN8 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
GTF3C4Q9UKN8 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
GTF3C4Q9UKN8 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GTF3C4Q9UKN8 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.05■□□□□ 0.64
GTF3C4Q9UKN8 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GTF3C4Q9UKN8 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GTF3C4Q9UKN8 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.05■□□□□ 0.64
GTF3C4Q9UKN8 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GTF3C4Q9UKN8 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GTF3C4Q9UKN8 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GTF3C4Q9UKN8 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GTF3C4Q9UKN8 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GTF3C4Q9UKN8 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GTF3C4Q9UKN8 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GTF3C4Q9UKN8 AC020916.1-201ENST00000587762 1774 ntBASIC19.04■□□□□ 0.64
GTF3C4Q9UKN8 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.04■□□□□ 0.64
GTF3C4Q9UKN8 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GTF3C4Q9UKN8 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GTF3C4Q9UKN8 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
GTF3C4Q9UKN8 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GTF3C4Q9UKN8 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
GTF3C4Q9UKN8 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.04■□□□□ 0.64
GTF3C4Q9UKN8 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GTF3C4Q9UKN8 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GTF3C4Q9UKN8 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.04■□□□□ 0.64
GTF3C4Q9UKN8 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
GTF3C4Q9UKN8 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.04■□□□□ 0.64
GTF3C4Q9UKN8 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GTF3C4Q9UKN8 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GTF3C4Q9UKN8 AC125634.1-201ENST00000438758 1403 ntBASIC19.04■□□□□ 0.64
GTF3C4Q9UKN8 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
GTF3C4Q9UKN8 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.04■□□□□ 0.64
GTF3C4Q9UKN8 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.04■□□□□ 0.64
GTF3C4Q9UKN8 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.04■□□□□ 0.64
GTF3C4Q9UKN8 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.04■□□□□ 0.64
GTF3C4Q9UKN8 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.04■□□□□ 0.64
GTF3C4Q9UKN8 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.04■□□□□ 0.64
GTF3C4Q9UKN8 AL138831.2-201ENST00000606564 490 ntBASIC19.04■□□□□ 0.64
GTF3C4Q9UKN8 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GTF3C4Q9UKN8 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
GTF3C4Q9UKN8 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
GTF3C4Q9UKN8 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.04■□□□□ 0.64
GTF3C4Q9UKN8 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
GTF3C4Q9UKN8 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 TP73-AS1-210ENST00000637775 1455 ntBASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
GTF3C4Q9UKN8 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
GTF3C4Q9UKN8 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
GTF3C4Q9UKN8 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.02■□□□□ 0.64
GTF3C4Q9UKN8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GTF3C4Q9UKN8 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GTF3C4Q9UKN8 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GTF3C4Q9UKN8 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GTF3C4Q9UKN8 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
GTF3C4Q9UKN8 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GTF3C4Q9UKN8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GTF3C4Q9UKN8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms