Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.7■□□□□ 0.26
KLHL1Q9NR64 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.7■□□□□ 0.26
KLHL1Q9NR64 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
KLHL1Q9NR64 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.7■□□□□ 0.26
KLHL1Q9NR64 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.7■□□□□ 0.26
KLHL1Q9NR64 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.7■□□□□ 0.26
KLHL1Q9NR64 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL1Q9NR64 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
KLHL1Q9NR64 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL1Q9NR64 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL1Q9NR64 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL1Q9NR64 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL1Q9NR64 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
KLHL1Q9NR64 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
KLHL1Q9NR64 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.7■□□□□ 0.26
KLHL1Q9NR64 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL1Q9NR64 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
KLHL1Q9NR64 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
KLHL1Q9NR64 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL1Q9NR64 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL1Q9NR64 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL1Q9NR64 AC020916.1-201ENST00000587762 1774 ntBASIC16.69■□□□□ 0.26
KLHL1Q9NR64 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL1Q9NR64 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL1Q9NR64 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.69■□□□□ 0.26
KLHL1Q9NR64 KRT89P-201ENST00000620027 1478 ntBASIC16.69■□□□□ 0.26
KLHL1Q9NR64 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL1Q9NR64 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.69■□□□□ 0.26
KLHL1Q9NR64 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL1Q9NR64 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.69■□□□□ 0.26
KLHL1Q9NR64 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
KLHL1Q9NR64 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL1Q9NR64 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL1Q9NR64 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.69■□□□□ 0.26
KLHL1Q9NR64 TSPY19P-201ENST00000418461 509 ntBASIC16.69■□□□□ 0.26
KLHL1Q9NR64 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.69■□□□□ 0.26
KLHL1Q9NR64 TSPY18P-201ENST00000441642 509 ntBASIC16.69■□□□□ 0.26
KLHL1Q9NR64 KRT17P6-201ENST00000453795 1220 ntBASIC16.69■□□□□ 0.26
KLHL1Q9NR64 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL1Q9NR64 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.69■□□□□ 0.26
KLHL1Q9NR64 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.69■□□□□ 0.26
KLHL1Q9NR64 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
KLHL1Q9NR64 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.69■□□□□ 0.26
KLHL1Q9NR64 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL1Q9NR64 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.69■□□□□ 0.26
KLHL1Q9NR64 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL1Q9NR64 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL1Q9NR64 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL1Q9NR64 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL1Q9NR64 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL1Q9NR64 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
KLHL1Q9NR64 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL1Q9NR64 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL1Q9NR64 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL1Q9NR64 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL1Q9NR64 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL1Q9NR64 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.69■□□□□ 0.26
KLHL1Q9NR64 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL1Q9NR64 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.69■□□□□ 0.26
KLHL1Q9NR64 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.69■□□□□ 0.26
KLHL1Q9NR64 AC012313.1-201ENST00000593393 3059 ntBASIC16.68■□□□□ 0.26
KLHL1Q9NR64 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KLHL1Q9NR64 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.68■□□□□ 0.26
KLHL1Q9NR64 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KLHL1Q9NR64 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KLHL1Q9NR64 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
KLHL1Q9NR64 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KLHL1Q9NR64 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
KLHL1Q9NR64 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
KLHL1Q9NR64 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
KLHL1Q9NR64 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.68■□□□□ 0.26
KLHL1Q9NR64 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KLHL1Q9NR64 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KLHL1Q9NR64 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
KLHL1Q9NR64 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
KLHL1Q9NR64 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
KLHL1Q9NR64 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KLHL1Q9NR64 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
KLHL1Q9NR64 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KLHL1Q9NR64 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KLHL1Q9NR64 EMBP1-201ENST00000458200 901 ntBASIC16.68■□□□□ 0.26
KLHL1Q9NR64 KRT18P31-201ENST00000506277 1292 ntBASIC16.68■□□□□ 0.26
KLHL1Q9NR64 AC011840.4-201ENST00000578471 627 ntBASIC16.68■□□□□ 0.26
KLHL1Q9NR64 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.68■□□□□ 0.26
KLHL1Q9NR64 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KLHL1Q9NR64 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KLHL1Q9NR64 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KLHL1Q9NR64 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.68■□□□□ 0.26
KLHL1Q9NR64 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
KLHL1Q9NR64 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
KLHL1Q9NR64 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KLHL1Q9NR64 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.26
KLHL1Q9NR64 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KLHL1Q9NR64 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
KLHL1Q9NR64 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.67■□□□□ 0.26
KLHL1Q9NR64 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
KLHL1Q9NR64 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
KLHL1Q9NR64 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KLHL1Q9NR64 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KLHL1Q9NR64 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms