Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 MIR770-201ENST00000390219 98 ntBASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 AC106028.4-201ENST00000614509 607 ntBASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 AC073592.4-201ENST00000623827 446 ntBASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 C20orf181-201ENST00000623918 480 ntBASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDLIM7Q9NR12 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDLIM7Q9NR12 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.71■□□□□ 0.75
PDLIM7Q9NR12 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PDLIM7Q9NR12 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.71■□□□□ 0.75
PDLIM7Q9NR12 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.71■□□□□ 0.75
PDLIM7Q9NR12 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.71■□□□□ 0.75
PDLIM7Q9NR12 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDLIM7Q9NR12 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDLIM7Q9NR12 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDLIM7Q9NR12 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDLIM7Q9NR12 COX5BP2-201ENST00000392354 334 ntBASIC19.71■□□□□ 0.75
PDLIM7Q9NR12 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDLIM7Q9NR12 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.71■□□□□ 0.75
PDLIM7Q9NR12 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.71■□□□□ 0.75
PDLIM7Q9NR12 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDLIM7Q9NR12 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDLIM7Q9NR12 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.71■□□□□ 0.75
PDLIM7Q9NR12 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PDLIM7Q9NR12 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.71■□□□□ 0.75
PDLIM7Q9NR12 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PDLIM7Q9NR12 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDLIM7Q9NR12 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDLIM7Q9NR12 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.71■□□□□ 0.75
PDLIM7Q9NR12 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
PDLIM7Q9NR12 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.71■□□□□ 0.75
PDLIM7Q9NR12 NEFHP1-201ENST00000412845 2629 ntBASIC19.71■□□□□ 0.75
PDLIM7Q9NR12 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDLIM7Q9NR12 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDLIM7Q9NR12 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDLIM7Q9NR12 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDLIM7Q9NR12 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PDLIM7Q9NR12 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PDLIM7Q9NR12 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDLIM7Q9NR12 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDLIM7Q9NR12 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDLIM7Q9NR12 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PDLIM7Q9NR12 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDLIM7Q9NR12 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.7■□□□□ 0.74
PDLIM7Q9NR12 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
PDLIM7Q9NR12 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDLIM7Q9NR12 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms