Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UPF2Q9HAU5 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
UPF2Q9HAU5 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UPF2Q9HAU5 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
UPF2Q9HAU5 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.75■■□□□ 1.07
UPF2Q9HAU5 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC21.75■■□□□ 1.07
UPF2Q9HAU5 AL023803.3-201ENST00000615559 522 ntBASIC21.75■■□□□ 1.07
UPF2Q9HAU5 AL359736.2-201ENST00000621992 437 ntBASIC21.75■■□□□ 1.07
UPF2Q9HAU5 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
UPF2Q9HAU5 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
UPF2Q9HAU5 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UPF2Q9HAU5 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
UPF2Q9HAU5 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UPF2Q9HAU5 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UPF2Q9HAU5 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
UPF2Q9HAU5 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
UPF2Q9HAU5 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
UPF2Q9HAU5 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UPF2Q9HAU5 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
UPF2Q9HAU5 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UPF2Q9HAU5 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
UPF2Q9HAU5 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UPF2Q9HAU5 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC21.74■■□□□ 1.07
UPF2Q9HAU5 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.74■■□□□ 1.07
UPF2Q9HAU5 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
UPF2Q9HAU5 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
UPF2Q9HAU5 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.74■■□□□ 1.07
UPF2Q9HAU5 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
UPF2Q9HAU5 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.74■■□□□ 1.07
UPF2Q9HAU5 AP001412.1-201ENST00000608405 714 ntBASIC21.74■■□□□ 1.07
UPF2Q9HAU5 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
UPF2Q9HAU5 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC21.74■■□□□ 1.07
UPF2Q9HAU5 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
UPF2Q9HAU5 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC21.74■■□□□ 1.07
UPF2Q9HAU5 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
UPF2Q9HAU5 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
UPF2Q9HAU5 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UPF2Q9HAU5 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UPF2Q9HAU5 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UPF2Q9HAU5 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
UPF2Q9HAU5 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
UPF2Q9HAU5 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
UPF2Q9HAU5 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC21.73■■□□□ 1.07
UPF2Q9HAU5 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
UPF2Q9HAU5 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
UPF2Q9HAU5 CCR12P-201ENST00000446203 998 ntBASIC21.73■■□□□ 1.07
UPF2Q9HAU5 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC21.73■■□□□ 1.07
UPF2Q9HAU5 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.73■■□□□ 1.07
UPF2Q9HAU5 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.73■■□□□ 1.07
UPF2Q9HAU5 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.73■■□□□ 1.07
UPF2Q9HAU5 REXO1L10P-201ENST00000615707 1290 ntBASIC21.73■■□□□ 1.07
UPF2Q9HAU5 REXO1L12P-201ENST00000622156 912 ntBASIC21.73■■□□□ 1.07
UPF2Q9HAU5 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
UPF2Q9HAU5 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
UPF2Q9HAU5 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
UPF2Q9HAU5 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC21.73■■□□□ 1.07
UPF2Q9HAU5 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
UPF2Q9HAU5 AC009949.1-201ENST00000623048 1830 ntBASIC21.73■■□□□ 1.07
UPF2Q9HAU5 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC21.73■■□□□ 1.07
UPF2Q9HAU5 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
UPF2Q9HAU5 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
UPF2Q9HAU5 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC21.72■■□□□ 1.07
UPF2Q9HAU5 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
UPF2Q9HAU5 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
UPF2Q9HAU5 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
UPF2Q9HAU5 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.72■■□□□ 1.07
UPF2Q9HAU5 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
UPF2Q9HAU5 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC21.72■■□□□ 1.07
UPF2Q9HAU5 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
UPF2Q9HAU5 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
UPF2Q9HAU5 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
UPF2Q9HAU5 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
UPF2Q9HAU5 BX088651.1-201ENST00000540551 451 ntBASIC21.72■■□□□ 1.07
UPF2Q9HAU5 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
UPF2Q9HAU5 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
UPF2Q9HAU5 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.72■■□□□ 1.07
UPF2Q9HAU5 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC21.72■■□□□ 1.07
UPF2Q9HAU5 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.72■■□□□ 1.07
UPF2Q9HAU5 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
UPF2Q9HAU5 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
UPF2Q9HAU5 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
UPF2Q9HAU5 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC21.72■■□□□ 1.07
UPF2Q9HAU5 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
UPF2Q9HAU5 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC21.72■■□□□ 1.07
UPF2Q9HAU5 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UPF2Q9HAU5 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UPF2Q9HAU5 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
UPF2Q9HAU5 STK24-203ENST00000397517 4578 ntTSL 2 BASIC21.71■■□□□ 1.07
UPF2Q9HAU5 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
UPF2Q9HAU5 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
UPF2Q9HAU5 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UPF2Q9HAU5 AL355355.2-201ENST00000442321 338 ntBASIC21.71■■□□□ 1.07
UPF2Q9HAU5 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.71■■□□□ 1.07
UPF2Q9HAU5 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC21.71■■□□□ 1.07
UPF2Q9HAU5 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
UPF2Q9HAU5 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UPF2Q9HAU5 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UPF2Q9HAU5 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
UPF2Q9HAU5 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
UPF2Q9HAU5 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms