Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.58■□□□□ 0.56
ATXN3LQ9H3M9 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.58■□□□□ 0.56
ATXN3LQ9H3M9 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ATXN3LQ9H3M9 AC025062.2-201ENST00000605477 670 ntBASIC18.58■□□□□ 0.56
ATXN3LQ9H3M9 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
ATXN3LQ9H3M9 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ATXN3LQ9H3M9 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ATXN3LQ9H3M9 AC010460.3-201ENST00000511359 1579 ntBASIC18.58■□□□□ 0.56
ATXN3LQ9H3M9 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.58■□□□□ 0.56
ATXN3LQ9H3M9 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
ATXN3LQ9H3M9 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ATXN3LQ9H3M9 AL354751.1-201ENST00000412768 1863 ntBASIC18.58■□□□□ 0.56
ATXN3LQ9H3M9 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
ATXN3LQ9H3M9 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ATXN3LQ9H3M9 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
ATXN3LQ9H3M9 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
ATXN3LQ9H3M9 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.58■□□□□ 0.56
ATXN3LQ9H3M9 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
ATXN3LQ9H3M9 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
ATXN3LQ9H3M9 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.57■□□□□ 0.56
ATXN3LQ9H3M9 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATXN3LQ9H3M9 KRT8P47-201ENST00000604727 1398 ntBASIC18.57■□□□□ 0.56
ATXN3LQ9H3M9 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ATXN3LQ9H3M9 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATXN3LQ9H3M9 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.57■□□□□ 0.56
ATXN3LQ9H3M9 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATXN3LQ9H3M9 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ATXN3LQ9H3M9 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.57■□□□□ 0.56
ATXN3LQ9H3M9 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.57■□□□□ 0.56
ATXN3LQ9H3M9 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.57■□□□□ 0.56
ATXN3LQ9H3M9 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
ATXN3LQ9H3M9 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.57■□□□□ 0.56
ATXN3LQ9H3M9 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATXN3LQ9H3M9 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.57■□□□□ 0.56
ATXN3LQ9H3M9 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATXN3LQ9H3M9 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.57■□□□□ 0.56
ATXN3LQ9H3M9 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.57■□□□□ 0.56
ATXN3LQ9H3M9 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.57■□□□□ 0.56
ATXN3LQ9H3M9 MTDHP4-201ENST00000600287 670 ntBASIC18.57■□□□□ 0.56
ATXN3LQ9H3M9 TERC-201ENST00000602385 541 ntBASIC18.57■□□□□ 0.56
ATXN3LQ9H3M9 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATXN3LQ9H3M9 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ATXN3LQ9H3M9 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATXN3LQ9H3M9 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.57■□□□□ 0.56
ATXN3LQ9H3M9 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ATXN3LQ9H3M9 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
ATXN3LQ9H3M9 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
ATXN3LQ9H3M9 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATXN3LQ9H3M9 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
ATXN3LQ9H3M9 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATXN3LQ9H3M9 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.57■□□□□ 0.56
ATXN3LQ9H3M9 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATXN3LQ9H3M9 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATXN3LQ9H3M9 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.56■□□□□ 0.56
ATXN3LQ9H3M9 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.56■□□□□ 0.56
ATXN3LQ9H3M9 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATXN3LQ9H3M9 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.56■□□□□ 0.56
ATXN3LQ9H3M9 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.56■□□□□ 0.56
ATXN3LQ9H3M9 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ATXN3LQ9H3M9 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
ATXN3LQ9H3M9 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ATXN3LQ9H3M9 DUTP2-201ENST00000519164 463 ntBASIC18.56■□□□□ 0.56
ATXN3LQ9H3M9 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.56■□□□□ 0.56
ATXN3LQ9H3M9 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATXN3LQ9H3M9 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ATXN3LQ9H3M9 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.56■□□□□ 0.56
ATXN3LQ9H3M9 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ATXN3LQ9H3M9 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ATXN3LQ9H3M9 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATXN3LQ9H3M9 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATXN3LQ9H3M9 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.56■□□□□ 0.56
ATXN3LQ9H3M9 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATXN3LQ9H3M9 AC093677.2-201ENST00000600169 1863 ntBASIC18.56■□□□□ 0.56
ATXN3LQ9H3M9 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATXN3LQ9H3M9 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATXN3LQ9H3M9 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ATXN3LQ9H3M9 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ATXN3LQ9H3M9 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATXN3LQ9H3M9 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATXN3LQ9H3M9 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.55■□□□□ 0.56
ATXN3LQ9H3M9 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATXN3LQ9H3M9 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ATXN3LQ9H3M9 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATXN3LQ9H3M9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATXN3LQ9H3M9 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATXN3LQ9H3M9 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATXN3LQ9H3M9 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
ATXN3LQ9H3M9 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
ATXN3LQ9H3M9 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ATXN3LQ9H3M9 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATXN3LQ9H3M9 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.55■□□□□ 0.56
ATXN3LQ9H3M9 BX005266.1-201ENST00000473402 457 ntBASIC18.55■□□□□ 0.56
ATXN3LQ9H3M9 AC122714.2-201ENST00000502787 707 ntBASIC18.55■□□□□ 0.56
ATXN3LQ9H3M9 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.55■□□□□ 0.56
ATXN3LQ9H3M9 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.55■□□□□ 0.56
ATXN3LQ9H3M9 AC012640.2-201ENST00000561606 901 ntBASIC18.55■□□□□ 0.56
ATXN3LQ9H3M9 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.55■□□□□ 0.56
ATXN3LQ9H3M9 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.55■□□□□ 0.56
ATXN3LQ9H3M9 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATXN3LQ9H3M9 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms