Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPAP1Q9BWH6 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
RPAP1Q9BWH6 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RPAP1Q9BWH6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC21.46■■□□□ 1.03
RPAP1Q9BWH6 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RPAP1Q9BWH6 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPAP1Q9BWH6 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPAP1Q9BWH6 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPAP1Q9BWH6 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPAP1Q9BWH6 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
RPAP1Q9BWH6 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPAP1Q9BWH6 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPAP1Q9BWH6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPAP1Q9BWH6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPAP1Q9BWH6 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPAP1Q9BWH6 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RPAP1Q9BWH6 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC21.46■■□□□ 1.03
RPAP1Q9BWH6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPAP1Q9BWH6 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPAP1Q9BWH6 KRT18P13-201ENST00000400056 1290 ntBASIC21.46■■□□□ 1.03
RPAP1Q9BWH6 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21.46■■□□□ 1.03
RPAP1Q9BWH6 RBSN-204ENST00000449050 903 ntTSL 2 BASIC21.46■■□□□ 1.03
RPAP1Q9BWH6 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC21.46■■□□□ 1.03
RPAP1Q9BWH6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC21.46■■□□□ 1.03
RPAP1Q9BWH6 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC21.46■■□□□ 1.03
RPAP1Q9BWH6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPAP1Q9BWH6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPAP1Q9BWH6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPAP1Q9BWH6 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC21.46■■□□□ 1.03
RPAP1Q9BWH6 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC21.45■■□□□ 1.03
RPAP1Q9BWH6 EML3-212ENST00000494176 2901 ntTSL 2 BASIC21.45■■□□□ 1.03
RPAP1Q9BWH6 EML3-216ENST00000529309 2909 ntTSL 2 BASIC21.45■■□□□ 1.03
RPAP1Q9BWH6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
RPAP1Q9BWH6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPAP1Q9BWH6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
RPAP1Q9BWH6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
RPAP1Q9BWH6 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPAP1Q9BWH6 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC21.45■■□□□ 1.02
RPAP1Q9BWH6 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPAP1Q9BWH6 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RPAP1Q9BWH6 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPAP1Q9BWH6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPAP1Q9BWH6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC21.45■■□□□ 1.02
RPAP1Q9BWH6 RPL18-214ENST00000552588 559 ntTSL 3 BASIC21.45■■□□□ 1.02
RPAP1Q9BWH6 COX5A-204ENST00000567270 579 ntTSL 3 BASIC21.45■■□□□ 1.02
RPAP1Q9BWH6 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC21.45■■□□□ 1.02
RPAP1Q9BWH6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC21.45■■□□□ 1.02
RPAP1Q9BWH6 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC21.45■■□□□ 1.02
RPAP1Q9BWH6 MTDHP3-201ENST00000594186 672 ntBASIC21.45■■□□□ 1.02
RPAP1Q9BWH6 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC21.45■■□□□ 1.02
RPAP1Q9BWH6 AC139530.3-201ENST00000620344 690 ntBASIC21.45■■□□□ 1.02
RPAP1Q9BWH6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
RPAP1Q9BWH6 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPAP1Q9BWH6 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPAP1Q9BWH6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
RPAP1Q9BWH6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RPAP1Q9BWH6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPAP1Q9BWH6 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.45■■□□□ 1.02
RPAP1Q9BWH6 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPAP1Q9BWH6 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC21.45■■□□□ 1.02
RPAP1Q9BWH6 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPAP1Q9BWH6 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPAP1Q9BWH6 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
RPAP1Q9BWH6 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPAP1Q9BWH6 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.44■■□□□ 1.02
RPAP1Q9BWH6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RPAP1Q9BWH6 AC012317.2-201ENST00000623305 2251 ntBASIC21.44■■□□□ 1.02
RPAP1Q9BWH6 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPAP1Q9BWH6 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RPAP1Q9BWH6 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPAP1Q9BWH6 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
RPAP1Q9BWH6 HNRNPDP1-201ENST00000439535 754 ntBASIC21.44■■□□□ 1.02
RPAP1Q9BWH6 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC21.44■■□□□ 1.02
RPAP1Q9BWH6 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RPAP1Q9BWH6 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC21.44■■□□□ 1.02
RPAP1Q9BWH6 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC21.44■■□□□ 1.02
RPAP1Q9BWH6 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC21.44■■□□□ 1.02
RPAP1Q9BWH6 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
RPAP1Q9BWH6 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPAP1Q9BWH6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RPAP1Q9BWH6 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.44■■□□□ 1.02
RPAP1Q9BWH6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RPAP1Q9BWH6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.44■■□□□ 1.02
RPAP1Q9BWH6 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPAP1Q9BWH6 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
RPAP1Q9BWH6 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPAP1Q9BWH6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RPAP1Q9BWH6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC21.43■■□□□ 1.02
RPAP1Q9BWH6 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RPAP1Q9BWH6 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC21.43■■□□□ 1.02
RPAP1Q9BWH6 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RPAP1Q9BWH6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC21.43■■□□□ 1.02
RPAP1Q9BWH6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC21.43■■□□□ 1.02
RPAP1Q9BWH6 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
RPAP1Q9BWH6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RPAP1Q9BWH6 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RPAP1Q9BWH6 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC21.43■■□□□ 1.02
RPAP1Q9BWH6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC21.43■■□□□ 1.02
RPAP1Q9BWH6 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC21.43■■□□□ 1.02
RPAP1Q9BWH6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms