Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 AC067852.2-201ENST00000590513 2313 ntBASIC10.58□□□□□ -0.72
LIMD2Q9BT23 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 GAD2-202ENST00000376248 680 ntTSL 5 BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 AC034232.1-201ENST00000506026 1064 ntBASIC10.58□□□□□ -0.72
LIMD2Q9BT23 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 AC104390.1-201ENST00000555663 520 ntBASIC10.58□□□□□ -0.72
LIMD2Q9BT23 DET1-205ENST00000558413 583 ntTSL 4 BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 MIR4674-201ENST00000582457 87 ntBASIC10.58□□□□□ -0.72
LIMD2Q9BT23 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC10.58□□□□□ -0.72
LIMD2Q9BT23 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 ILF2-202ENST00000368681 726 ntTSL 2 BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 CRAT-202ENST00000393384 973 ntTSL 2 BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 LIN28AP1-201ENST00000429574 405 ntBASIC10.57□□□□□ -0.72
LIMD2Q9BT23 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 AC093827.2-201ENST00000512654 315 ntBASIC10.57□□□□□ -0.72
LIMD2Q9BT23 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 NAT14-202ENST00000587400 416 ntTSL 5 BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms