Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SLF1Q9BQI6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.55■□□□□ 0.88
SLF1Q9BQI6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SLF1Q9BQI6 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLF1Q9BQI6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.55■□□□□ 0.88
SLF1Q9BQI6 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLF1Q9BQI6 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLF1Q9BQI6 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.55■□□□□ 0.88
SLF1Q9BQI6 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SLF1Q9BQI6 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLF1Q9BQI6 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.55■□□□□ 0.88
SLF1Q9BQI6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLF1Q9BQI6 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.55■□□□□ 0.88
SLF1Q9BQI6 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
SLF1Q9BQI6 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLF1Q9BQI6 AD001527.2-201ENST00000622994 785 ntBASIC20.55■□□□□ 0.88
SLF1Q9BQI6 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SLF1Q9BQI6 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLF1Q9BQI6 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.55■□□□□ 0.88
SLF1Q9BQI6 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLF1Q9BQI6 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLF1Q9BQI6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLF1Q9BQI6 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.55■□□□□ 0.88
SLF1Q9BQI6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLF1Q9BQI6 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLF1Q9BQI6 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLF1Q9BQI6 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLF1Q9BQI6 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLF1Q9BQI6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLF1Q9BQI6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.54■□□□□ 0.88
SLF1Q9BQI6 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.54■□□□□ 0.88
SLF1Q9BQI6 AC093677.2-201ENST00000600169 1863 ntBASIC20.54■□□□□ 0.88
SLF1Q9BQI6 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.54■□□□□ 0.88
SLF1Q9BQI6 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLF1Q9BQI6 AC079776.2-201ENST00000641154 1609 ntBASIC20.54■□□□□ 0.88
SLF1Q9BQI6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLF1Q9BQI6 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLF1Q9BQI6 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLF1Q9BQI6 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLF1Q9BQI6 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SLF1Q9BQI6 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLF1Q9BQI6 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.54■□□□□ 0.88
SLF1Q9BQI6 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.54■□□□□ 0.88
SLF1Q9BQI6 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.54■□□□□ 0.88
SLF1Q9BQI6 AC012640.2-201ENST00000561606 901 ntBASIC20.54■□□□□ 0.88
SLF1Q9BQI6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLF1Q9BQI6 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLF1Q9BQI6 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SLF1Q9BQI6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLF1Q9BQI6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLF1Q9BQI6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLF1Q9BQI6 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.54■□□□□ 0.88
SLF1Q9BQI6 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
SLF1Q9BQI6 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SLF1Q9BQI6 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLF1Q9BQI6 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.53■□□□□ 0.88
SLF1Q9BQI6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.53■□□□□ 0.88
SLF1Q9BQI6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SLF1Q9BQI6 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SLF1Q9BQI6 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SLF1Q9BQI6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLF1Q9BQI6 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SLF1Q9BQI6 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLF1Q9BQI6 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLF1Q9BQI6 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLF1Q9BQI6 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLF1Q9BQI6 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLF1Q9BQI6 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SLF1Q9BQI6 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
SLF1Q9BQI6 COX5BP2-201ENST00000392354 334 ntBASIC20.53■□□□□ 0.88
SLF1Q9BQI6 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.53■□□□□ 0.88
SLF1Q9BQI6 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLF1Q9BQI6 IGHV3-22-201ENST00000520721 359 ntBASIC20.53■□□□□ 0.88
SLF1Q9BQI6 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.53■□□□□ 0.88
SLF1Q9BQI6 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
SLF1Q9BQI6 AC008735.5-201ENST00000623544 497 ntBASIC20.53■□□□□ 0.88
SLF1Q9BQI6 AC117500.6-201ENST00000624871 588 ntBASIC20.53■□□□□ 0.88
SLF1Q9BQI6 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLF1Q9BQI6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SLF1Q9BQI6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLF1Q9BQI6 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLF1Q9BQI6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SLF1Q9BQI6 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLF1Q9BQI6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.53■□□□□ 0.88
SLF1Q9BQI6 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.53■□□□□ 0.88
SLF1Q9BQI6 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLF1Q9BQI6 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLF1Q9BQI6 ZNF259P1-201ENST00000407656 1365 ntBASIC20.52■□□□□ 0.88
SLF1Q9BQI6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLF1Q9BQI6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLF1Q9BQI6 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLF1Q9BQI6 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.52■□□□□ 0.88
SLF1Q9BQI6 AC103564.2-201ENST00000432853 1299 ntBASIC20.52■□□□□ 0.88
SLF1Q9BQI6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLF1Q9BQI6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.52■□□□□ 0.88
SLF1Q9BQI6 BX005266.1-201ENST00000473402 457 ntBASIC20.52■□□□□ 0.88
SLF1Q9BQI6 AC092910.1-201ENST00000482027 1129 ntBASIC20.52■□□□□ 0.88
SLF1Q9BQI6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.52■□□□□ 0.88
SLF1Q9BQI6 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.52■□□□□ 0.88
SLF1Q9BQI6 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms