Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDCA3Q99618 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDCA3Q99618 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.28■□□□□ 0.52
CDCA3Q99618 AL513480.1-201ENST00000451731 511 ntBASIC18.28■□□□□ 0.52
CDCA3Q99618 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.28■□□□□ 0.52
CDCA3Q99618 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.28■□□□□ 0.52
CDCA3Q99618 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.28■□□□□ 0.52
CDCA3Q99618 AC138761.1-201ENST00000584393 385 ntBASIC18.28■□□□□ 0.52
CDCA3Q99618 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.28■□□□□ 0.52
CDCA3Q99618 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.28■□□□□ 0.52
CDCA3Q99618 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDCA3Q99618 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.28■□□□□ 0.52
CDCA3Q99618 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.28■□□□□ 0.52
CDCA3Q99618 AJ011932.1-201ENST00000621707 465 ntBASIC18.28■□□□□ 0.52
CDCA3Q99618 AC009093.7-201ENST00000623853 1223 ntBASIC18.28■□□□□ 0.52
CDCA3Q99618 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.28■□□□□ 0.52
CDCA3Q99618 AC006116.8-202ENST00000587620 1550 ntBASIC18.28■□□□□ 0.52
CDCA3Q99618 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDCA3Q99618 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDCA3Q99618 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDCA3Q99618 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDCA3Q99618 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDCA3Q99618 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDCA3Q99618 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDCA3Q99618 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.28■□□□□ 0.52
CDCA3Q99618 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDCA3Q99618 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDCA3Q99618 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDCA3Q99618 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
CDCA3Q99618 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.27■□□□□ 0.52
CDCA3Q99618 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDCA3Q99618 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDCA3Q99618 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.27■□□□□ 0.52
CDCA3Q99618 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDCA3Q99618 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDCA3Q99618 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDCA3Q99618 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
CDCA3Q99618 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDCA3Q99618 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.27■□□□□ 0.52
CDCA3Q99618 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDCA3Q99618 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDCA3Q99618 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.27■□□□□ 0.52
CDCA3Q99618 ADH5P3-201ENST00000433842 1137 ntBASIC18.27■□□□□ 0.52
CDCA3Q99618 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.27■□□□□ 0.52
CDCA3Q99618 AC190387.1-201ENST00000551683 408 ntBASIC18.27■□□□□ 0.52
CDCA3Q99618 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.27■□□□□ 0.52
CDCA3Q99618 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.27■□□□□ 0.52
CDCA3Q99618 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.27■□□□□ 0.52
CDCA3Q99618 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.27■□□□□ 0.52
CDCA3Q99618 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDCA3Q99618 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CDCA3Q99618 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDCA3Q99618 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDCA3Q99618 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.27■□□□□ 0.51
CDCA3Q99618 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDCA3Q99618 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CDCA3Q99618 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCA3Q99618 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCA3Q99618 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDCA3Q99618 AL096828.2-201ENST00000567259 1965 ntBASIC18.26■□□□□ 0.51
CDCA3Q99618 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.26■□□□□ 0.51
CDCA3Q99618 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.26■□□□□ 0.51
CDCA3Q99618 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CDCA3Q99618 PMS2P4-201ENST00000412466 1052 ntBASIC18.26■□□□□ 0.51
CDCA3Q99618 AL627223.1-201ENST00000416693 442 ntBASIC18.26■□□□□ 0.51
CDCA3Q99618 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.26■□□□□ 0.51
CDCA3Q99618 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.26■□□□□ 0.51
CDCA3Q99618 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDCA3Q99618 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.26■□□□□ 0.51
CDCA3Q99618 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.26■□□□□ 0.51
CDCA3Q99618 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.26■□□□□ 0.51
CDCA3Q99618 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.26■□□□□ 0.51
CDCA3Q99618 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CDCA3Q99618 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDCA3Q99618 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.26■□□□□ 0.51
CDCA3Q99618 AC116562.4-201ENST00000641316 2276 ntBASIC18.26■□□□□ 0.51
CDCA3Q99618 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCA3Q99618 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCA3Q99618 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDCA3Q99618 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCA3Q99618 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCA3Q99618 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.25■□□□□ 0.51
CDCA3Q99618 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.25■□□□□ 0.51
CDCA3Q99618 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA3Q99618 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA3Q99618 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA3Q99618 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA3Q99618 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA3Q99618 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CDCA3Q99618 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA3Q99618 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA3Q99618 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA3Q99618 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.25■□□□□ 0.51
CDCA3Q99618 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA3Q99618 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA3Q99618 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CDCA3Q99618 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.25■□□□□ 0.51
CDCA3Q99618 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.25■□□□□ 0.51
CDCA3Q99618 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.25■□□□□ 0.51
CDCA3Q99618 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms