Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
EYA3Q99504 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
EYA3Q99504 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
EYA3Q99504 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
EYA3Q99504 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
EYA3Q99504 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
EYA3Q99504 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
EYA3Q99504 SMN2-210ENST00000511812 867 ntTSL 2 BASIC21.38■■□□□ 1.01
EYA3Q99504 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
EYA3Q99504 AL353135.1-201ENST00000606729 504 ntBASIC21.38■■□□□ 1.01
EYA3Q99504 AC010507.1-201ENST00000633895 436 ntBASIC21.38■■□□□ 1.01
EYA3Q99504 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC21.38■■□□□ 1.01
EYA3Q99504 AC009336.1-201ENST00000608941 1553 ntBASIC21.38■■□□□ 1.01
EYA3Q99504 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
EYA3Q99504 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
EYA3Q99504 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC21.38■■□□□ 1.01
EYA3Q99504 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
EYA3Q99504 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
EYA3Q99504 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
EYA3Q99504 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
EYA3Q99504 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
EYA3Q99504 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
EYA3Q99504 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
EYA3Q99504 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
EYA3Q99504 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
EYA3Q99504 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
EYA3Q99504 BCAR1-209ENST00000546196 1340 ntBASIC21.37■■□□□ 1.01
EYA3Q99504 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.37■■□□□ 1.01
EYA3Q99504 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
EYA3Q99504 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
EYA3Q99504 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
EYA3Q99504 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
EYA3Q99504 AP002472.1-201ENST00000577490 586 ntBASIC21.37■■□□□ 1.01
EYA3Q99504 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC21.37■■□□□ 1.01
EYA3Q99504 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC21.37■■□□□ 1.01
EYA3Q99504 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
EYA3Q99504 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
EYA3Q99504 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC21.37■■□□□ 1.01
EYA3Q99504 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
EYA3Q99504 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
EYA3Q99504 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.37■■□□□ 1.01
EYA3Q99504 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
EYA3Q99504 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
EYA3Q99504 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
EYA3Q99504 AC093503.3-201ENST00000624917 2352 ntBASIC21.37■■□□□ 1.01
EYA3Q99504 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
EYA3Q99504 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
EYA3Q99504 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
EYA3Q99504 TNXA-203ENST00000507684 2038 ntBASIC21.36■■□□□ 1.01
EYA3Q99504 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC21.36■■□□□ 1.01
EYA3Q99504 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
EYA3Q99504 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.36■■□□□ 1.01
EYA3Q99504 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
EYA3Q99504 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
EYA3Q99504 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EYA3Q99504 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EYA3Q99504 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.36■■□□□ 1.01
EYA3Q99504 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC21.36■■□□□ 1.01
EYA3Q99504 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EYA3Q99504 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.36■■□□□ 1.01
EYA3Q99504 AL645939.2-201ENST00000427340 991 ntBASIC21.36■■□□□ 1.01
EYA3Q99504 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
EYA3Q99504 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC21.36■■□□□ 1.01
EYA3Q99504 POLD4-207ENST00000531239 584 ntTSL 2 BASIC21.36■■□□□ 1.01
EYA3Q99504 CCND1-203ENST00000536559 553 ntTSL 3 BASIC21.36■■□□□ 1.01
EYA3Q99504 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
EYA3Q99504 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC21.36■■□□□ 1.01
EYA3Q99504 AQP6-205ENST00000618286 829 ntTSL 5 BASIC21.36■■□□□ 1.01
EYA3Q99504 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EYA3Q99504 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
EYA3Q99504 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EYA3Q99504 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EYA3Q99504 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC21.36■■□□□ 1.01
EYA3Q99504 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
EYA3Q99504 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.36■■□□□ 1.01
EYA3Q99504 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EYA3Q99504 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EYA3Q99504 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
EYA3Q99504 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.35■■□□□ 1.01
EYA3Q99504 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC21.35■■□□□ 1.01
EYA3Q99504 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
EYA3Q99504 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
EYA3Q99504 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
EYA3Q99504 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EYA3Q99504 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC21.35■■□□□ 1.01
EYA3Q99504 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
EYA3Q99504 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EYA3Q99504 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC21.35■■□□□ 1.01
EYA3Q99504 LINC00982-205ENST00000420957 435 ntBASIC21.35■■□□□ 1.01
EYA3Q99504 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC21.35■■□□□ 1.01
EYA3Q99504 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
EYA3Q99504 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC21.35■■□□□ 1.01
EYA3Q99504 KRT19P2-202ENST00000557173 1012 ntBASIC21.35■■□□□ 1.01
EYA3Q99504 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC21.35■■□□□ 1.01
EYA3Q99504 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC21.35■■□□□ 1.01
EYA3Q99504 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC21.35■■□□□ 1.01
EYA3Q99504 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.35■■□□□ 1.01
EYA3Q99504 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EYA3Q99504 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
EYA3Q99504 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms