Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
S1PR3Q99500 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
S1PR3Q99500 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
S1PR3Q99500 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
S1PR3Q99500 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC14.64□□□□□ -0.07
S1PR3Q99500 SPDYE15P-201ENST00000424157 909 ntBASIC14.64□□□□□ -0.07
S1PR3Q99500 AL359075.1-203ENST00000462729 1002 ntBASIC14.64□□□□□ -0.07
S1PR3Q99500 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
S1PR3Q99500 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
S1PR3Q99500 AC022616.7-201ENST00000525383 220 ntBASIC14.64□□□□□ -0.07
S1PR3Q99500 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.64□□□□□ -0.07
S1PR3Q99500 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.64□□□□□ -0.07
S1PR3Q99500 ZNF444P1-201ENST00000559497 298 ntBASIC14.64□□□□□ -0.07
S1PR3Q99500 AL049597.2-201ENST00000565575 961 ntBASIC14.64□□□□□ -0.07
S1PR3Q99500 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.64□□□□□ -0.07
S1PR3Q99500 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.64□□□□□ -0.07
S1PR3Q99500 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
S1PR3Q99500 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
S1PR3Q99500 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
S1PR3Q99500 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
S1PR3Q99500 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
S1PR3Q99500 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
S1PR3Q99500 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC14.64□□□□□ -0.07
S1PR3Q99500 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
S1PR3Q99500 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
S1PR3Q99500 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
S1PR3Q99500 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.64□□□□□ -0.07
S1PR3Q99500 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
S1PR3Q99500 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.64□□□□□ -0.07
S1PR3Q99500 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
S1PR3Q99500 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.64□□□□□ -0.07
S1PR3Q99500 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
S1PR3Q99500 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
S1PR3Q99500 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
S1PR3Q99500 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
S1PR3Q99500 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.63□□□□□ -0.07
S1PR3Q99500 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.63□□□□□ -0.07
S1PR3Q99500 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
S1PR3Q99500 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
S1PR3Q99500 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.63□□□□□ -0.07
S1PR3Q99500 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.63□□□□□ -0.07
S1PR3Q99500 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
S1PR3Q99500 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
S1PR3Q99500 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
S1PR3Q99500 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
S1PR3Q99500 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
S1PR3Q99500 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
S1PR3Q99500 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.63□□□□□ -0.07
S1PR3Q99500 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.63□□□□□ -0.07
S1PR3Q99500 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
S1PR3Q99500 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
S1PR3Q99500 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
S1PR3Q99500 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
S1PR3Q99500 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
S1PR3Q99500 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC14.63□□□□□ -0.07
S1PR3Q99500 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
S1PR3Q99500 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.63□□□□□ -0.07
S1PR3Q99500 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.63□□□□□ -0.07
S1PR3Q99500 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.63□□□□□ -0.07
S1PR3Q99500 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.63□□□□□ -0.07
S1PR3Q99500 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.63□□□□□ -0.07
S1PR3Q99500 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.63□□□□□ -0.07
S1PR3Q99500 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
S1PR3Q99500 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
S1PR3Q99500 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
S1PR3Q99500 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
S1PR3Q99500 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
S1PR3Q99500 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
S1PR3Q99500 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.63□□□□□ -0.07
S1PR3Q99500 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.63□□□□□ -0.07
S1PR3Q99500 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.63□□□□□ -0.07
S1PR3Q99500 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.63□□□□□ -0.07
S1PR3Q99500 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.63□□□□□ -0.07
S1PR3Q99500 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
S1PR3Q99500 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.63□□□□□ -0.07
S1PR3Q99500 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
S1PR3Q99500 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
S1PR3Q99500 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.63□□□□□ -0.07
S1PR3Q99500 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
S1PR3Q99500 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC14.63□□□□□ -0.07
S1PR3Q99500 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
S1PR3Q99500 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
S1PR3Q99500 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
S1PR3Q99500 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
S1PR3Q99500 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
S1PR3Q99500 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
S1PR3Q99500 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
S1PR3Q99500 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
S1PR3Q99500 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
S1PR3Q99500 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
S1PR3Q99500 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
S1PR3Q99500 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
S1PR3Q99500 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
S1PR3Q99500 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
S1PR3Q99500 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
S1PR3Q99500 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
S1PR3Q99500 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
S1PR3Q99500 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
S1PR3Q99500 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
S1PR3Q99500 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms