Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 AP003392.6-201ENST00000607709 325 ntBASIC5.32□□□□□ -1.56
HMCN1Q96RW7 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 AC010460.3-201ENST00000511359 1579 ntBASIC5.32□□□□□ -1.56
HMCN1Q96RW7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 AL512430.1-201ENST00000392575 860 ntBASIC5.32□□□□□ -1.56
HMCN1Q96RW7 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 CTBP2P5-201ENST00000454986 1264 ntBASIC5.32□□□□□ -1.56
HMCN1Q96RW7 AC104784.1-201ENST00000473096 294 ntBASIC5.32□□□□□ -1.56
HMCN1Q96RW7 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 RN7SL555P-201ENST00000584742 339 ntBASIC5.32□□□□□ -1.56
HMCN1Q96RW7 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 SNX21-203ENST00000372541 771 ntTSL 2 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 FO681548.1-201ENST00000455617 1132 ntBASIC5.32□□□□□ -1.56
HMCN1Q96RW7 AC108725.1-201ENST00000495472 409 ntBASIC5.32□□□□□ -1.56
HMCN1Q96RW7 HIST2H2BC-201ENST00000498492 580 ntBASIC5.32□□□□□ -1.56
HMCN1Q96RW7 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 RARRES2P8-201ENST00000566335 367 ntBASIC5.32□□□□□ -1.56
HMCN1Q96RW7 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 STK25P1-201ENST00000585406 838 ntBASIC5.32□□□□□ -1.56
HMCN1Q96RW7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 AC006128.1-201ENST00000624704 1661 ntBASIC5.31□□□□□ -1.56
HMCN1Q96RW7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 PDIA3P1-201ENST00000471856 1510 ntBASIC5.31□□□□□ -1.56
HMCN1Q96RW7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC5.31□□□□□ -1.56
HMCN1Q96RW7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 FEM1AP4-201ENST00000443167 1987 ntBASIC5.31□□□□□ -1.56
HMCN1Q96RW7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
HMCN1Q96RW7 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms