Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 AC131212.4-201ENST00000623606 975 ntBASIC13.42□□□□□ -0.26
AP1S3Q96PC3 AC133041.1-202ENST00000642053 222 ntBASIC13.42□□□□□ -0.26
AP1S3Q96PC3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 AC098934.4-201ENST00000564127 592 ntBASIC13.41□□□□□ -0.26
AP1S3Q96PC3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 AC103702.1-201ENST00000548801 2630 ntBASIC13.41□□□□□ -0.26
AP1S3Q96PC3 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S3Q96PC3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC13.4□□□□□ -0.26
AP1S3Q96PC3 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.4□□□□□ -0.26
AP1S3Q96PC3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
AP1S3Q96PC3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
AP1S3Q96PC3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP1S3Q96PC3 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
AP1S3Q96PC3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP1S3Q96PC3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
AP1S3Q96PC3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP1S3Q96PC3 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP1S3Q96PC3 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP1S3Q96PC3 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
AP1S3Q96PC3 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP1S3Q96PC3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms