Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NECTIN4Q96NY8 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NECTIN4Q96NY8 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NECTIN4Q96NY8 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NECTIN4Q96NY8 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
NECTIN4Q96NY8 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NECTIN4Q96NY8 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
NECTIN4Q96NY8 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
NECTIN4Q96NY8 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NECTIN4Q96NY8 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NECTIN4Q96NY8 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NECTIN4Q96NY8 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.24■□□□□ 0.51
NECTIN4Q96NY8 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
NECTIN4Q96NY8 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.24■□□□□ 0.51
NECTIN4Q96NY8 AC105339.1-204ENST00000636249 355 ntBASIC18.24■□□□□ 0.51
NECTIN4Q96NY8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
NECTIN4Q96NY8 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
NECTIN4Q96NY8 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.24■□□□□ 0.51
NECTIN4Q96NY8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
NECTIN4Q96NY8 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NECTIN4Q96NY8 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NECTIN4Q96NY8 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NECTIN4Q96NY8 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NECTIN4Q96NY8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
NECTIN4Q96NY8 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NECTIN4Q96NY8 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NECTIN4Q96NY8 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.23■□□□□ 0.51
NECTIN4Q96NY8 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NECTIN4Q96NY8 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
NECTIN4Q96NY8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NECTIN4Q96NY8 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NECTIN4Q96NY8 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.23■□□□□ 0.51
NECTIN4Q96NY8 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NECTIN4Q96NY8 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.23■□□□□ 0.51
NECTIN4Q96NY8 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.23■□□□□ 0.51
NECTIN4Q96NY8 STK19B-204ENST00000512515 211 ntBASIC18.23■□□□□ 0.51
NECTIN4Q96NY8 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.23■□□□□ 0.51
NECTIN4Q96NY8 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.23■□□□□ 0.51
NECTIN4Q96NY8 OR7E47P-204ENST00000575924 449 ntBASIC18.23■□□□□ 0.51
NECTIN4Q96NY8 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NECTIN4Q96NY8 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.23■□□□□ 0.51
NECTIN4Q96NY8 AL353135.1-201ENST00000606729 504 ntBASIC18.23■□□□□ 0.51
NECTIN4Q96NY8 REXO1L3P-201ENST00000622202 1288 ntBASIC18.23■□□□□ 0.51
NECTIN4Q96NY8 AC092902.6-201ENST00000641783 218 ntBASIC18.23■□□□□ 0.51
NECTIN4Q96NY8 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
NECTIN4Q96NY8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NECTIN4Q96NY8 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NECTIN4Q96NY8 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.23■□□□□ 0.51
NECTIN4Q96NY8 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NECTIN4Q96NY8 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.23■□□□□ 0.51
NECTIN4Q96NY8 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NECTIN4Q96NY8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
NECTIN4Q96NY8 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NECTIN4Q96NY8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NECTIN4Q96NY8 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.22■□□□□ 0.51
NECTIN4Q96NY8 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NECTIN4Q96NY8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
NECTIN4Q96NY8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NECTIN4Q96NY8 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NECTIN4Q96NY8 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NECTIN4Q96NY8 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.22■□□□□ 0.51
NECTIN4Q96NY8 AC004461.1-201ENST00000412461 403 ntBASIC18.22■□□□□ 0.51
NECTIN4Q96NY8 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.22■□□□□ 0.51
NECTIN4Q96NY8 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NECTIN4Q96NY8 IGHV3-52-201ENST00000519770 353 ntBASIC18.22■□□□□ 0.51
NECTIN4Q96NY8 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
NECTIN4Q96NY8 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.22■□□□□ 0.51
NECTIN4Q96NY8 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.22■□□□□ 0.51
NECTIN4Q96NY8 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.22■□□□□ 0.51
NECTIN4Q96NY8 STK25P1-201ENST00000585406 838 ntBASIC18.22■□□□□ 0.51
NECTIN4Q96NY8 AC068137.2-201ENST00000605408 478 ntBASIC18.22■□□□□ 0.51
NECTIN4Q96NY8 AC019129.2-201ENST00000609837 1235 ntBASIC18.22■□□□□ 0.51
NECTIN4Q96NY8 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NECTIN4Q96NY8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
NECTIN4Q96NY8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
NECTIN4Q96NY8 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NECTIN4Q96NY8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NECTIN4Q96NY8 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NECTIN4Q96NY8 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NECTIN4Q96NY8 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
NECTIN4Q96NY8 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.21■□□□□ 0.51
NECTIN4Q96NY8 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NECTIN4Q96NY8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NECTIN4Q96NY8 AC097637.2-201ENST00000624096 1997 ntBASIC18.21■□□□□ 0.51
NECTIN4Q96NY8 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NECTIN4Q96NY8 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
NECTIN4Q96NY8 AL121761.2-201ENST00000598007 1648 ntBASIC18.21■□□□□ 0.51
NECTIN4Q96NY8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NECTIN4Q96NY8 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
NECTIN4Q96NY8 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NECTIN4Q96NY8 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NECTIN4Q96NY8 PAWRP1-201ENST00000451083 565 ntBASIC18.21■□□□□ 0.51
NECTIN4Q96NY8 AC023141.5-201ENST00000458585 616 ntBASIC18.21■□□□□ 0.51
NECTIN4Q96NY8 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NECTIN4Q96NY8 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.21■□□□□ 0.51
NECTIN4Q96NY8 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.21■□□□□ 0.51
NECTIN4Q96NY8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.21■□□□□ 0.51
NECTIN4Q96NY8 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
NECTIN4Q96NY8 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NECTIN4Q96NY8 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms