Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC17Q96LX7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.58■□□□□ 0.88
CCDC17Q96LX7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.58■□□□□ 0.88
CCDC17Q96LX7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC17Q96LX7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.58■□□□□ 0.88
CCDC17Q96LX7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC17Q96LX7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC17Q96LX7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC17Q96LX7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC17Q96LX7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC17Q96LX7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC17Q96LX7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC17Q96LX7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CCDC17Q96LX7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC17Q96LX7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC17Q96LX7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC17Q96LX7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC17Q96LX7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC17Q96LX7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC17Q96LX7 AC009947.1-201ENST00000444350 727 ntBASIC20.57■□□□□ 0.88
CCDC17Q96LX7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.57■□□□□ 0.88
CCDC17Q96LX7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC17Q96LX7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.57■□□□□ 0.88
CCDC17Q96LX7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC17Q96LX7 AL139424.1-201ENST00000607572 797 ntBASIC20.57■□□□□ 0.88
CCDC17Q96LX7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC17Q96LX7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC17Q96LX7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC17Q96LX7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC17Q96LX7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC17Q96LX7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC17Q96LX7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC17Q96LX7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CCDC17Q96LX7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC17Q96LX7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC17Q96LX7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC17Q96LX7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC17Q96LX7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC17Q96LX7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC17Q96LX7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC17Q96LX7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC17Q96LX7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC17Q96LX7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CCDC17Q96LX7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC17Q96LX7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC17Q96LX7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CCDC17Q96LX7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC17Q96LX7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC17Q96LX7 AC140113.2-201ENST00000604370 208 ntBASIC20.56■□□□□ 0.88
CCDC17Q96LX7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC17Q96LX7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC17Q96LX7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC17Q96LX7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC17Q96LX7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC17Q96LX7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC17Q96LX7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CCDC17Q96LX7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CCDC17Q96LX7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CCDC17Q96LX7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC17Q96LX7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC17Q96LX7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC17Q96LX7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC17Q96LX7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC17Q96LX7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC17Q96LX7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC17Q96LX7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC17Q96LX7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC17Q96LX7 MIR940-201ENST00000401276 94 ntBASIC20.55■□□□□ 0.88
CCDC17Q96LX7 MED15P5-201ENST00000423150 992 ntBASIC20.55■□□□□ 0.88
CCDC17Q96LX7 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.55■□□□□ 0.88
CCDC17Q96LX7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC17Q96LX7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC17Q96LX7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC17Q96LX7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC17Q96LX7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC17Q96LX7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC17Q96LX7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC17Q96LX7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC17Q96LX7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
CCDC17Q96LX7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC17Q96LX7 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC17Q96LX7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC17Q96LX7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
CCDC17Q96LX7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC17Q96LX7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC17Q96LX7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CCDC17Q96LX7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC17Q96LX7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC17Q96LX7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC17Q96LX7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC17Q96LX7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC17Q96LX7 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CCDC17Q96LX7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC17Q96LX7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC17Q96LX7 ELK2BP-201ENST00000415014 1224 ntBASIC20.54■□□□□ 0.88
CCDC17Q96LX7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC17Q96LX7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC17Q96LX7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC17Q96LX7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC17Q96LX7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms