Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.79■□□□□ 0.44
SHDQ96IW2 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SHDQ96IW2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHDQ96IW2 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SHDQ96IW2 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.78■□□□□ 0.44
SHDQ96IW2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHDQ96IW2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SHDQ96IW2 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.78■□□□□ 0.44
SHDQ96IW2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHDQ96IW2 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHDQ96IW2 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHDQ96IW2 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SHDQ96IW2 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
SHDQ96IW2 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.78■□□□□ 0.44
SHDQ96IW2 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.78■□□□□ 0.44
SHDQ96IW2 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.78■□□□□ 0.44
SHDQ96IW2 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.78■□□□□ 0.44
SHDQ96IW2 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.78■□□□□ 0.44
SHDQ96IW2 AC022145.2-201ENST00000598203 171 ntBASIC17.78■□□□□ 0.44
SHDQ96IW2 AC019129.2-201ENST00000609837 1235 ntBASIC17.78■□□□□ 0.44
SHDQ96IW2 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHDQ96IW2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHDQ96IW2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SHDQ96IW2 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHDQ96IW2 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHDQ96IW2 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SHDQ96IW2 PI4KAP1-204ENST00000612579 1703 ntBASIC17.78■□□□□ 0.44
SHDQ96IW2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHDQ96IW2 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
SHDQ96IW2 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.77■□□□□ 0.44
SHDQ96IW2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHDQ96IW2 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.77■□□□□ 0.44
SHDQ96IW2 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SHDQ96IW2 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SHDQ96IW2 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHDQ96IW2 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.77■□□□□ 0.44
SHDQ96IW2 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SHDQ96IW2 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.77■□□□□ 0.44
SHDQ96IW2 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHDQ96IW2 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHDQ96IW2 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.77■□□□□ 0.44
SHDQ96IW2 LINC00982-205ENST00000420957 435 ntBASIC17.77■□□□□ 0.44
SHDQ96IW2 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SHDQ96IW2 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.77■□□□□ 0.44
SHDQ96IW2 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.77■□□□□ 0.44
SHDQ96IW2 AJ011932.1-201ENST00000621707 465 ntBASIC17.77■□□□□ 0.44
SHDQ96IW2 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SHDQ96IW2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
SHDQ96IW2 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.77■□□□□ 0.43
SHDQ96IW2 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SHDQ96IW2 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.77■□□□□ 0.43
SHDQ96IW2 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SHDQ96IW2 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SHDQ96IW2 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.77■□□□□ 0.43
SHDQ96IW2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
SHDQ96IW2 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.76■□□□□ 0.43
SHDQ96IW2 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.76■□□□□ 0.43
SHDQ96IW2 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHDQ96IW2 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHDQ96IW2 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHDQ96IW2 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.76■□□□□ 0.43
SHDQ96IW2 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHDQ96IW2 PMS2P4-201ENST00000412466 1052 ntBASIC17.76■□□□□ 0.43
SHDQ96IW2 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHDQ96IW2 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.76■□□□□ 0.43
SHDQ96IW2 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.76■□□□□ 0.43
SHDQ96IW2 AC109322.1-201ENST00000524499 1264 ntBASIC17.76■□□□□ 0.43
SHDQ96IW2 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.76■□□□□ 0.43
SHDQ96IW2 AC005498.2-205ENST00000593218 784 ntBASIC17.76■□□□□ 0.43
SHDQ96IW2 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.76■□□□□ 0.43
SHDQ96IW2 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.76■□□□□ 0.43
SHDQ96IW2 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.76■□□□□ 0.43
SHDQ96IW2 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.76■□□□□ 0.43
SHDQ96IW2 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHDQ96IW2 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHDQ96IW2 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.76■□□□□ 0.43
SHDQ96IW2 BX276092.7-203ENST00000637198 1536 ntBASIC17.76■□□□□ 0.43
SHDQ96IW2 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHDQ96IW2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHDQ96IW2 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHDQ96IW2 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SHDQ96IW2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHDQ96IW2 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHDQ96IW2 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SHDQ96IW2 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SHDQ96IW2 AC009336.1-201ENST00000608941 1553 ntBASIC17.75■□□□□ 0.43
SHDQ96IW2 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.75■□□□□ 0.43
SHDQ96IW2 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SHDQ96IW2 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.75■□□□□ 0.43
SHDQ96IW2 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SHDQ96IW2 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.75■□□□□ 0.43
SHDQ96IW2 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.75■□□□□ 0.43
SHDQ96IW2 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.75■□□□□ 0.43
SHDQ96IW2 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SHDQ96IW2 AC069262.1-201ENST00000539058 672 ntBASIC17.75■□□□□ 0.43
SHDQ96IW2 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.75■□□□□ 0.43
SHDQ96IW2 AC015911.4-201ENST00000588022 1070 ntBASIC17.75■□□□□ 0.43
SHDQ96IW2 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.75■□□□□ 0.43
SHDQ96IW2 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.75■□□□□ 0.43
SHDQ96IW2 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms