Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AC097374.2-201ENST00000618617 1306 ntBASIC18.74■□□□□ 0.59
TRIM11Q96F44 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM11Q96F44 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM11Q96F44 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TRIM11Q96F44 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM11Q96F44 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM11Q96F44 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM11Q96F44 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM11Q96F44 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM11Q96F44 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM11Q96F44 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM11Q96F44 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM11Q96F44 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM11Q96F44 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM11Q96F44 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
TRIM11Q96F44 RNF126P1-202ENST00000569893 925 ntBASIC18.73■□□□□ 0.59
TRIM11Q96F44 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TRIM11Q96F44 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.73■□□□□ 0.59
TRIM11Q96F44 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TRIM11Q96F44 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM11Q96F44 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM11Q96F44 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TRIM11Q96F44 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM11Q96F44 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM11Q96F44 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
TRIM11Q96F44 CROCCP2-202ENST00000412962 2773 ntBASIC18.72■□□□□ 0.59
TRIM11Q96F44 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM11Q96F44 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM11Q96F44 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM11Q96F44 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM11Q96F44 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM11Q96F44 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM11Q96F44 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM11Q96F44 AL645929.1-201ENST00000420084 975 ntBASIC18.72■□□□□ 0.59
TRIM11Q96F44 SPDYE13P-201ENST00000445314 798 ntBASIC18.72■□□□□ 0.59
TRIM11Q96F44 GUSBP12-201ENST00000513727 720 ntBASIC18.72■□□□□ 0.59
TRIM11Q96F44 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
TRIM11Q96F44 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM11Q96F44 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM11Q96F44 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.72■□□□□ 0.59
TRIM11Q96F44 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM11Q96F44 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM11Q96F44 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM11Q96F44 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM11Q96F44 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.72■□□□□ 0.59
TRIM11Q96F44 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM11Q96F44 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.71■□□□□ 0.59
TRIM11Q96F44 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM11Q96F44 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM11Q96F44 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM11Q96F44 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM11Q96F44 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM11Q96F44 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM11Q96F44 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM11Q96F44 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM11Q96F44 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TRIM11Q96F44 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM11Q96F44 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TRIM11Q96F44 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM11Q96F44 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM11Q96F44 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM11Q96F44 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM11Q96F44 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM11Q96F44 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM11Q96F44 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.71■□□□□ 0.59
TRIM11Q96F44 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM11Q96F44 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM11Q96F44 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM11Q96F44 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM11Q96F44 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM11Q96F44 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
TRIM11Q96F44 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.71■□□□□ 0.58
TRIM11Q96F44 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
TRIM11Q96F44 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM11Q96F44 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM11Q96F44 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM11Q96F44 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM11Q96F44 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TRIM11Q96F44 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TRIM11Q96F44 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM11Q96F44 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM11Q96F44 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.7■□□□□ 0.58
TRIM11Q96F44 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TRIM11Q96F44 AC002558.1-201ENST00000488906 803 ntBASIC18.7■□□□□ 0.58
TRIM11Q96F44 DUX4L26-201ENST00000489078 1255 ntBASIC18.7■□□□□ 0.58
TRIM11Q96F44 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM11Q96F44 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.7■□□□□ 0.58
TRIM11Q96F44 AC016396.2-201ENST00000562575 1417 ntBASIC18.7■□□□□ 0.58
TRIM11Q96F44 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.7■□□□□ 0.58
TRIM11Q96F44 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.7■□□□□ 0.58
TRIM11Q96F44 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM11Q96F44 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM11Q96F44 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM11Q96F44 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM11Q96F44 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM11Q96F44 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM11Q96F44 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM11Q96F44 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM11Q96F44 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TRIM11Q96F44 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms