Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
APH1AQ96BI3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
APH1AQ96BI3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
APH1AQ96BI3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.7■□□□□ 0.1
APH1AQ96BI3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.7■□□□□ 0.1
APH1AQ96BI3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.7■□□□□ 0.1
APH1AQ96BI3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
APH1AQ96BI3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.7■□□□□ 0.1
APH1AQ96BI3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.7■□□□□ 0.1
APH1AQ96BI3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.7■□□□□ 0.1
APH1AQ96BI3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
APH1AQ96BI3 MIR5100-201ENST00000579544 119 ntBASIC15.7■□□□□ 0.1
APH1AQ96BI3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
APH1AQ96BI3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.7■□□□□ 0.1
APH1AQ96BI3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.7■□□□□ 0.1
APH1AQ96BI3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
APH1AQ96BI3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
APH1AQ96BI3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
APH1AQ96BI3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.7■□□□□ 0.1
APH1AQ96BI3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
APH1AQ96BI3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
APH1AQ96BI3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
APH1AQ96BI3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.7■□□□□ 0.1
APH1AQ96BI3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.7■□□□□ 0.1
APH1AQ96BI3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
APH1AQ96BI3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.7■□□□□ 0.1
APH1AQ96BI3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
APH1AQ96BI3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
APH1AQ96BI3 AC010460.3-201ENST00000511359 1579 ntBASIC15.7■□□□□ 0.1
APH1AQ96BI3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
APH1AQ96BI3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
APH1AQ96BI3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
APH1AQ96BI3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.7■□□□□ 0.1
APH1AQ96BI3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APH1AQ96BI3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APH1AQ96BI3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
APH1AQ96BI3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
APH1AQ96BI3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APH1AQ96BI3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
APH1AQ96BI3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
APH1AQ96BI3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.69■□□□□ 0.1
APH1AQ96BI3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
APH1AQ96BI3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APH1AQ96BI3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
APH1AQ96BI3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APH1AQ96BI3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.69■□□□□ 0.1
APH1AQ96BI3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.69■□□□□ 0.1
APH1AQ96BI3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.69■□□□□ 0.1
APH1AQ96BI3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
APH1AQ96BI3 SLC25A6P5-201ENST00000435663 894 ntBASIC15.69■□□□□ 0.1
APH1AQ96BI3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APH1AQ96BI3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.69■□□□□ 0.1
APH1AQ96BI3 IFNL4P1-201ENST00000607083 540 ntBASIC15.69■□□□□ 0.1
APH1AQ96BI3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.69■□□□□ 0.1
APH1AQ96BI3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.69■□□□□ 0.1
APH1AQ96BI3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
APH1AQ96BI3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APH1AQ96BI3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APH1AQ96BI3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.69■□□□□ 0.1
APH1AQ96BI3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
APH1AQ96BI3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
APH1AQ96BI3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
APH1AQ96BI3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.69■□□□□ 0.1
APH1AQ96BI3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APH1AQ96BI3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
APH1AQ96BI3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APH1AQ96BI3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
APH1AQ96BI3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
APH1AQ96BI3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
APH1AQ96BI3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
APH1AQ96BI3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.68■□□□□ 0.1
APH1AQ96BI3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APH1AQ96BI3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
APH1AQ96BI3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
APH1AQ96BI3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APH1AQ96BI3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APH1AQ96BI3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
APH1AQ96BI3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APH1AQ96BI3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
APH1AQ96BI3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
APH1AQ96BI3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APH1AQ96BI3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
APH1AQ96BI3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.68■□□□□ 0.1
APH1AQ96BI3 COX5BP2-201ENST00000392354 334 ntBASIC15.68■□□□□ 0.1
APH1AQ96BI3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.68■□□□□ 0.1
APH1AQ96BI3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.68■□□□□ 0.1
APH1AQ96BI3 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.68■□□□□ 0.1
APH1AQ96BI3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
APH1AQ96BI3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.68■□□□□ 0.1
APH1AQ96BI3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.68■□□□□ 0.1
APH1AQ96BI3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
APH1AQ96BI3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.68■□□□□ 0.1
APH1AQ96BI3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.68■□□□□ 0.1
APH1AQ96BI3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.68■□□□□ 0.1
APH1AQ96BI3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
APH1AQ96BI3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
APH1AQ96BI3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
APH1AQ96BI3 INTS4P1-201ENST00000438455 1935 ntBASIC15.68■□□□□ 0.1
APH1AQ96BI3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
APH1AQ96BI3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms