Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2E3Q969T4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2E3Q969T4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.03■□□□□ 0.32
UBE2E3Q969T4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2E3Q969T4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.03■□□□□ 0.32
UBE2E3Q969T4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.03■□□□□ 0.32
UBE2E3Q969T4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
UBE2E3Q969T4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.03■□□□□ 0.32
UBE2E3Q969T4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
UBE2E3Q969T4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.03■□□□□ 0.32
UBE2E3Q969T4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2E3Q969T4 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2E3Q969T4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.03■□□□□ 0.32
UBE2E3Q969T4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.03■□□□□ 0.32
UBE2E3Q969T4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2E3Q969T4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2E3Q969T4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.02■□□□□ 0.32
UBE2E3Q969T4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2E3Q969T4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2E3Q969T4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2E3Q969T4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
UBE2E3Q969T4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
UBE2E3Q969T4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2E3Q969T4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.02■□□□□ 0.32
UBE2E3Q969T4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2E3Q969T4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2E3Q969T4 COX5BP2-201ENST00000392354 334 ntBASIC17.02■□□□□ 0.32
UBE2E3Q969T4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
UBE2E3Q969T4 PCED1CP-201ENST00000419887 785 ntBASIC17.02■□□□□ 0.32
UBE2E3Q969T4 AC005104.2-201ENST00000427818 678 ntBASIC17.02■□□□□ 0.32
UBE2E3Q969T4 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.02■□□□□ 0.32
UBE2E3Q969T4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.02■□□□□ 0.32
UBE2E3Q969T4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2E3Q969T4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.02■□□□□ 0.32
UBE2E3Q969T4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.02■□□□□ 0.32
UBE2E3Q969T4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.02■□□□□ 0.32
UBE2E3Q969T4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
UBE2E3Q969T4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2E3Q969T4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2E3Q969T4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2E3Q969T4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.02■□□□□ 0.31
UBE2E3Q969T4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.02■□□□□ 0.31
UBE2E3Q969T4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
UBE2E3Q969T4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
UBE2E3Q969T4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
UBE2E3Q969T4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
UBE2E3Q969T4 IER3-202ENST00000376377 1350 ntBASIC17.02■□□□□ 0.31
UBE2E3Q969T4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
UBE2E3Q969T4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 AC026471.1-201ENST00000564629 3026 ntBASIC17.01■□□□□ 0.31
UBE2E3Q969T4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 REXO1L11P-201ENST00000620964 1927 ntBASIC17.01■□□□□ 0.31
UBE2E3Q969T4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2E3Q969T4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
UBE2E3Q969T4 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17■□□□□ 0.31
UBE2E3Q969T4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
UBE2E3Q969T4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBE2E3Q969T4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
UBE2E3Q969T4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
UBE2E3Q969T4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBE2E3Q969T4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
UBE2E3Q969T4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17■□□□□ 0.31
UBE2E3Q969T4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBE2E3Q969T4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms