Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPB3Q92617 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPB3Q92617 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14□□□□□ -0.17
NPIPB3Q92617 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14□□□□□ -0.17
NPIPB3Q92617 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC14□□□□□ -0.17
NPIPB3Q92617 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPB3Q92617 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC14□□□□□ -0.17
NPIPB3Q92617 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPB3Q92617 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
NPIPB3Q92617 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
NPIPB3Q92617 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB3Q92617 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
NPIPB3Q92617 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB3Q92617 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.99□□□□□ -0.17
NPIPB3Q92617 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC13.99□□□□□ -0.17
NPIPB3Q92617 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.99□□□□□ -0.17
NPIPB3Q92617 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB3Q92617 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB3Q92617 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB3Q92617 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB3Q92617 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB3Q92617 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB3Q92617 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB3Q92617 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB3Q92617 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
NPIPB3Q92617 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC13.99□□□□□ -0.17
NPIPB3Q92617 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC13.99□□□□□ -0.17
NPIPB3Q92617 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB3Q92617 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC13.99□□□□□ -0.17
NPIPB3Q92617 CRAT-202ENST00000393384 973 ntTSL 2 BASIC13.99□□□□□ -0.17
NPIPB3Q92617 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC13.99□□□□□ -0.17
NPIPB3Q92617 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC13.99□□□□□ -0.17
NPIPB3Q92617 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB3Q92617 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
NPIPB3Q92617 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC13.99□□□□□ -0.17
NPIPB3Q92617 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB3Q92617 MIR4497-201ENST00000583208 89 ntBASIC13.99□□□□□ -0.17
NPIPB3Q92617 USF2-205ENST00000594064 1179 ntTSL 2 BASIC13.99□□□□□ -0.17
NPIPB3Q92617 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC13.99□□□□□ -0.17
NPIPB3Q92617 LINC01451-201ENST00000623792 534 ntBASIC13.99□□□□□ -0.17
NPIPB3Q92617 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
NPIPB3Q92617 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB3Q92617 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
NPIPB3Q92617 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB3Q92617 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB3Q92617 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB3Q92617 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
NPIPB3Q92617 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB3Q92617 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB3Q92617 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC13.99□□□□□ -0.17
NPIPB3Q92617 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB3Q92617 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
NPIPB3Q92617 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.99□□□□□ -0.17
NPIPB3Q92617 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC13.99□□□□□ -0.17
NPIPB3Q92617 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB3Q92617 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB3Q92617 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC13.98□□□□□ -0.17
NPIPB3Q92617 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB3Q92617 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
NPIPB3Q92617 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB3Q92617 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
NPIPB3Q92617 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB3Q92617 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB3Q92617 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC13.98□□□□□ -0.17
NPIPB3Q92617 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC13.98□□□□□ -0.17
NPIPB3Q92617 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB3Q92617 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB3Q92617 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB3Q92617 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
NPIPB3Q92617 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC13.98□□□□□ -0.17
NPIPB3Q92617 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
NPIPB3Q92617 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NPIPB3Q92617 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB3Q92617 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
NPIPB3Q92617 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB3Q92617 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
NPIPB3Q92617 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB3Q92617 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB3Q92617 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
NPIPB3Q92617 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC13.98□□□□□ -0.17
NPIPB3Q92617 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB3Q92617 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC13.98□□□□□ -0.17
NPIPB3Q92617 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC13.98□□□□□ -0.17
NPIPB3Q92617 AC113404.2-201ENST00000507884 177 ntBASIC13.98□□□□□ -0.17
NPIPB3Q92617 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC13.98□□□□□ -0.17
NPIPB3Q92617 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB3Q92617 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC13.98□□□□□ -0.17
NPIPB3Q92617 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC13.98□□□□□ -0.17
NPIPB3Q92617 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB3Q92617 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB3Q92617 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB3Q92617 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB3Q92617 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB3Q92617 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB3Q92617 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
NPIPB3Q92617 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB3Q92617 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC13.98□□□□□ -0.17
NPIPB3Q92617 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB3Q92617 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB3Q92617 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms