Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 SLC25A1P1-201ENST00000528351 927 ntBASIC23.05■■□□□ 1.28
RTF1Q92541 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC23.05■■□□□ 1.28
RTF1Q92541 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
RTF1Q92541 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC23.05■■□□□ 1.28
RTF1Q92541 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RTF1Q92541 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC23.05■■□□□ 1.28
RTF1Q92541 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RTF1Q92541 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC23.05■■□□□ 1.28
RTF1Q92541 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC23.05■■□□□ 1.28
RTF1Q92541 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RTF1Q92541 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RTF1Q92541 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTF1Q92541 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTF1Q92541 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RTF1Q92541 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RTF1Q92541 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTF1Q92541 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RTF1Q92541 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
RTF1Q92541 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
RTF1Q92541 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTF1Q92541 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC23.04■■□□□ 1.28
RTF1Q92541 INIP-202ENST00000374236 874 ntTSL 2 BASIC23.04■■□□□ 1.28
RTF1Q92541 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC23.04■■□□□ 1.28
RTF1Q92541 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC23.04■■□□□ 1.28
RTF1Q92541 IGHV3-52-201ENST00000519770 353 ntBASIC23.04■■□□□ 1.28
RTF1Q92541 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
RTF1Q92541 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC23.04■■□□□ 1.28
RTF1Q92541 AC008735.5-201ENST00000623544 497 ntBASIC23.04■■□□□ 1.28
RTF1Q92541 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTF1Q92541 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTF1Q92541 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTF1Q92541 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC23.04■■□□□ 1.28
RTF1Q92541 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC23.04■■□□□ 1.28
RTF1Q92541 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTF1Q92541 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTF1Q92541 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTF1Q92541 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RTF1Q92541 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTF1Q92541 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RTF1Q92541 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
RTF1Q92541 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RTF1Q92541 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RTF1Q92541 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
RTF1Q92541 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC23.03■■□□□ 1.28
RTF1Q92541 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC23.03■■□□□ 1.28
RTF1Q92541 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTF1Q92541 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC23.03■■□□□ 1.28
RTF1Q92541 KLF4P1-201ENST00000412782 1185 ntBASIC23.03■■□□□ 1.28
RTF1Q92541 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC23.03■■□□□ 1.28
RTF1Q92541 LAGE3P1-201ENST00000425356 484 ntBASIC23.03■■□□□ 1.28
RTF1Q92541 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC23.03■■□□□ 1.28
RTF1Q92541 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC23.03■■□□□ 1.28
RTF1Q92541 AC012640.2-201ENST00000561606 901 ntBASIC23.03■■□□□ 1.28
RTF1Q92541 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RTF1Q92541 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC23.03■■□□□ 1.28
RTF1Q92541 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RTF1Q92541 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTF1Q92541 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC23.03■■□□□ 1.28
RTF1Q92541 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTF1Q92541 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC23.03■■□□□ 1.28
RTF1Q92541 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTF1Q92541 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RTF1Q92541 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
RTF1Q92541 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTF1Q92541 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTF1Q92541 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC23.03■■□□□ 1.28
RTF1Q92541 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
RTF1Q92541 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC23.03■■□□□ 1.28
RTF1Q92541 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC23.03■■□□□ 1.28
RTF1Q92541 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RTF1Q92541 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC23.02■■□□□ 1.28
RTF1Q92541 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC23.02■■□□□ 1.28
RTF1Q92541 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RTF1Q92541 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC23.02■■□□□ 1.28
RTF1Q92541 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC23.02■■□□□ 1.28
RTF1Q92541 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTF1Q92541 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTF1Q92541 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
RTF1Q92541 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RTF1Q92541 AC003669.1-201ENST00000334569 611 ntBASIC23.02■■□□□ 1.28
RTF1Q92541 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC23.02■■□□□ 1.28
RTF1Q92541 RPL13AP23-201ENST00000480739 586 ntBASIC23.02■■□□□ 1.28
RTF1Q92541 AC092910.1-201ENST00000482027 1129 ntBASIC23.02■■□□□ 1.28
RTF1Q92541 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC23.02■■□□□ 1.28
RTF1Q92541 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC23.02■■□□□ 1.28
RTF1Q92541 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTF1Q92541 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
RTF1Q92541 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC23.02■■□□□ 1.28
RTF1Q92541 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTF1Q92541 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTF1Q92541 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
RTF1Q92541 COMP-202ENST00000425807 2292 ntTSL 2 BASIC23.02■■□□□ 1.28
RTF1Q92541 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTF1Q92541 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTF1Q92541 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC23.01■■□□□ 1.27
RTF1Q92541 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTF1Q92541 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC23.01■■□□□ 1.27
RTF1Q92541 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTF1Q92541 CSF3-203ENST00000394148 622 ntTSL 3 BASIC23.01■■□□□ 1.27
RTF1Q92541 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms