Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC44A1Q8WWI5 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC44A1Q8WWI5 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SLC44A1Q8WWI5 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SLC44A1Q8WWI5 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC44A1Q8WWI5 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC44A1Q8WWI5 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC44A1Q8WWI5 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC44A1Q8WWI5 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC44A1Q8WWI5 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.74■□□□□ 0.43
SLC44A1Q8WWI5 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC44A1Q8WWI5 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.74■□□□□ 0.43
SLC44A1Q8WWI5 AC009154.2-201ENST00000621177 724 ntBASIC17.74■□□□□ 0.43
SLC44A1Q8WWI5 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC44A1Q8WWI5 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC44A1Q8WWI5 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC44A1Q8WWI5 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC44A1Q8WWI5 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.74■□□□□ 0.43
SLC44A1Q8WWI5 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC44A1Q8WWI5 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SLC44A1Q8WWI5 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC44A1Q8WWI5 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
SLC44A1Q8WWI5 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC44A1Q8WWI5 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC44A1Q8WWI5 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC44A1Q8WWI5 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC44A1Q8WWI5 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC44A1Q8WWI5 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC44A1Q8WWI5 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC44A1Q8WWI5 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SLC44A1Q8WWI5 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SLC44A1Q8WWI5 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC44A1Q8WWI5 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC44A1Q8WWI5 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC44A1Q8WWI5 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC44A1Q8WWI5 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC44A1Q8WWI5 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC44A1Q8WWI5 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.73■□□□□ 0.43
SLC44A1Q8WWI5 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC44A1Q8WWI5 AC112698.1-201ENST00000510299 916 ntBASIC17.73■□□□□ 0.43
SLC44A1Q8WWI5 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC44A1Q8WWI5 GCSHP2-201ENST00000560971 527 ntBASIC17.73■□□□□ 0.43
SLC44A1Q8WWI5 MIR4497-201ENST00000583208 89 ntBASIC17.73■□□□□ 0.43
SLC44A1Q8WWI5 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC44A1Q8WWI5 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC44A1Q8WWI5 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
SLC44A1Q8WWI5 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC44A1Q8WWI5 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SLC44A1Q8WWI5 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
SLC44A1Q8WWI5 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC44A1Q8WWI5 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC44A1Q8WWI5 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC44A1Q8WWI5 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 AC034232.1-201ENST00000506026 1064 ntBASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 AC004263.2-201ENST00000617183 678 ntBASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 AC079602.3-201ENST00000623931 403 ntBASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC44A1Q8WWI5 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.71■□□□□ 0.43
SLC44A1Q8WWI5 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SLC44A1Q8WWI5 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
SLC44A1Q8WWI5 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC44A1Q8WWI5 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC44A1Q8WWI5 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC44A1Q8WWI5 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC44A1Q8WWI5 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC44A1Q8WWI5 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms