Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
U2AF1L4Q8WU68 AP000867.4-201ENST00000641616 219 ntBASIC20.22■□□□□ 0.83
U2AF1L4Q8WU68 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
U2AF1L4Q8WU68 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
U2AF1L4Q8WU68 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
U2AF1L4Q8WU68 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.22■□□□□ 0.83
U2AF1L4Q8WU68 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.22■□□□□ 0.83
U2AF1L4Q8WU68 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
U2AF1L4Q8WU68 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
U2AF1L4Q8WU68 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.22■□□□□ 0.83
U2AF1L4Q8WU68 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
U2AF1L4Q8WU68 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
U2AF1L4Q8WU68 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
U2AF1L4Q8WU68 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.21■□□□□ 0.83
U2AF1L4Q8WU68 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.21■□□□□ 0.83
U2AF1L4Q8WU68 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.21■□□□□ 0.83
U2AF1L4Q8WU68 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
U2AF1L4Q8WU68 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
U2AF1L4Q8WU68 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.21■□□□□ 0.83
U2AF1L4Q8WU68 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
U2AF1L4Q8WU68 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.21■□□□□ 0.83
U2AF1L4Q8WU68 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
U2AF1L4Q8WU68 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.21■□□□□ 0.83
U2AF1L4Q8WU68 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
U2AF1L4Q8WU68 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
U2AF1L4Q8WU68 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
U2AF1L4Q8WU68 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
U2AF1L4Q8WU68 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
U2AF1L4Q8WU68 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
U2AF1L4Q8WU68 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
U2AF1L4Q8WU68 MIR149-201ENST00000384879 89 ntBASIC20.21■□□□□ 0.83
U2AF1L4Q8WU68 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.21■□□□□ 0.83
U2AF1L4Q8WU68 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
U2AF1L4Q8WU68 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.21■□□□□ 0.83
U2AF1L4Q8WU68 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.21■□□□□ 0.83
U2AF1L4Q8WU68 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
U2AF1L4Q8WU68 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.21■□□□□ 0.83
U2AF1L4Q8WU68 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
U2AF1L4Q8WU68 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
U2AF1L4Q8WU68 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
U2AF1L4Q8WU68 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
U2AF1L4Q8WU68 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.21■□□□□ 0.83
U2AF1L4Q8WU68 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.21■□□□□ 0.83
U2AF1L4Q8WU68 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.21■□□□□ 0.83
U2AF1L4Q8WU68 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
U2AF1L4Q8WU68 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
U2AF1L4Q8WU68 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
U2AF1L4Q8WU68 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.83
U2AF1L4Q8WU68 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
U2AF1L4Q8WU68 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
U2AF1L4Q8WU68 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
U2AF1L4Q8WU68 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.2■□□□□ 0.82
U2AF1L4Q8WU68 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
U2AF1L4Q8WU68 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
U2AF1L4Q8WU68 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
U2AF1L4Q8WU68 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.2■□□□□ 0.82
U2AF1L4Q8WU68 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
U2AF1L4Q8WU68 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
U2AF1L4Q8WU68 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
U2AF1L4Q8WU68 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.2■□□□□ 0.82
U2AF1L4Q8WU68 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.2■□□□□ 0.82
U2AF1L4Q8WU68 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.2■□□□□ 0.82
U2AF1L4Q8WU68 AC092865.6-201ENST00000642101 219 ntBASIC20.2■□□□□ 0.82
U2AF1L4Q8WU68 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
U2AF1L4Q8WU68 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.2■□□□□ 0.82
U2AF1L4Q8WU68 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
U2AF1L4Q8WU68 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
U2AF1L4Q8WU68 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
U2AF1L4Q8WU68 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
U2AF1L4Q8WU68 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
U2AF1L4Q8WU68 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
U2AF1L4Q8WU68 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
U2AF1L4Q8WU68 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.2■□□□□ 0.82
U2AF1L4Q8WU68 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
U2AF1L4Q8WU68 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
U2AF1L4Q8WU68 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.19■□□□□ 0.82
U2AF1L4Q8WU68 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
U2AF1L4Q8WU68 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
U2AF1L4Q8WU68 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
U2AF1L4Q8WU68 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
U2AF1L4Q8WU68 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.19■□□□□ 0.82
U2AF1L4Q8WU68 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
U2AF1L4Q8WU68 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
U2AF1L4Q8WU68 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.19■□□□□ 0.82
U2AF1L4Q8WU68 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
U2AF1L4Q8WU68 AC073621.1-201ENST00000392730 636 ntBASIC20.19■□□□□ 0.82
U2AF1L4Q8WU68 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.19■□□□□ 0.82
U2AF1L4Q8WU68 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.19■□□□□ 0.82
U2AF1L4Q8WU68 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
U2AF1L4Q8WU68 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.19■□□□□ 0.82
U2AF1L4Q8WU68 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.19■□□□□ 0.82
U2AF1L4Q8WU68 BX005266.1-201ENST00000473402 457 ntBASIC20.19■□□□□ 0.82
U2AF1L4Q8WU68 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC20.19■□□□□ 0.82
U2AF1L4Q8WU68 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.19■□□□□ 0.82
U2AF1L4Q8WU68 AC006557.2-201ENST00000592985 1240 ntBASIC20.19■□□□□ 0.82
U2AF1L4Q8WU68 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
U2AF1L4Q8WU68 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
U2AF1L4Q8WU68 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.19■□□□□ 0.82
U2AF1L4Q8WU68 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.19■□□□□ 0.82
U2AF1L4Q8WU68 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms