Protein–RNA interactions for Protein: Q8TBB1

LNX1, E3 ubiquitin-protein ligase LNX, humanhuman

Predicted RBP Predictions only

Length 728 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LNX1Q8TBB1 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LNX1Q8TBB1 AC009154.2-201ENST00000621177 724 ntBASIC19.27■□□□□ 0.68
LNX1Q8TBB1 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.27■□□□□ 0.68
LNX1Q8TBB1 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LNX1Q8TBB1 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LNX1Q8TBB1 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
LNX1Q8TBB1 HLA-A-201ENST00000376802 1334 ntBASIC19.26■□□□□ 0.67
LNX1Q8TBB1 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.26■□□□□ 0.67
LNX1Q8TBB1 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LNX1Q8TBB1 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LNX1Q8TBB1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.26■□□□□ 0.67
LNX1Q8TBB1 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LNX1Q8TBB1 LINC00602-201ENST00000629776 2065 ntBASIC19.26■□□□□ 0.67
LNX1Q8TBB1 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.26■□□□□ 0.67
LNX1Q8TBB1 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LNX1Q8TBB1 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
LNX1Q8TBB1 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LNX1Q8TBB1 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LNX1Q8TBB1 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LNX1Q8TBB1 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LNX1Q8TBB1 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LNX1Q8TBB1 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LNX1Q8TBB1 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LNX1Q8TBB1 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LNX1Q8TBB1 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.26■□□□□ 0.67
LNX1Q8TBB1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.26■□□□□ 0.67
LNX1Q8TBB1 RCN1P2-201ENST00000398357 915 ntBASIC19.26■□□□□ 0.67
LNX1Q8TBB1 MTCL1P1-201ENST00000446207 792 ntBASIC19.26■□□□□ 0.67
LNX1Q8TBB1 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
LNX1Q8TBB1 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
LNX1Q8TBB1 TP73-AS1-207ENST00000624167 988 ntBASIC19.26■□□□□ 0.67
LNX1Q8TBB1 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.26■□□□□ 0.67
LNX1Q8TBB1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LNX1Q8TBB1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
LNX1Q8TBB1 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.26■□□□□ 0.67
LNX1Q8TBB1 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
LNX1Q8TBB1 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LNX1Q8TBB1 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LNX1Q8TBB1 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LNX1Q8TBB1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.25■□□□□ 0.67
LNX1Q8TBB1 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LNX1Q8TBB1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.25■□□□□ 0.67
LNX1Q8TBB1 AL645608.8-201ENST00000606034 2086 ntBASIC19.25■□□□□ 0.67
LNX1Q8TBB1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
LNX1Q8TBB1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LNX1Q8TBB1 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.25■□□□□ 0.67
LNX1Q8TBB1 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.25■□□□□ 0.67
LNX1Q8TBB1 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LNX1Q8TBB1 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LNX1Q8TBB1 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LNX1Q8TBB1 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
LNX1Q8TBB1 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LNX1Q8TBB1 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.25■□□□□ 0.67
LNX1Q8TBB1 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.25■□□□□ 0.67
LNX1Q8TBB1 AC132008.2-207ENST00000454517 770 ntBASIC19.25■□□□□ 0.67
LNX1Q8TBB1 AC079776.4-201ENST00000511039 504 ntBASIC19.25■□□□□ 0.67
LNX1Q8TBB1 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.25■□□□□ 0.67
LNX1Q8TBB1 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
LNX1Q8TBB1 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LNX1Q8TBB1 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LNX1Q8TBB1 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LNX1Q8TBB1 AC139713.2-201ENST00000641328 2723 ntBASIC19.25■□□□□ 0.67
LNX1Q8TBB1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LNX1Q8TBB1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LNX1Q8TBB1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LNX1Q8TBB1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LNX1Q8TBB1 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LNX1Q8TBB1 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LNX1Q8TBB1 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.25■□□□□ 0.67
LNX1Q8TBB1 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LNX1Q8TBB1 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LNX1Q8TBB1 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LNX1Q8TBB1 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LNX1Q8TBB1 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LNX1Q8TBB1 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LNX1Q8TBB1 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.24■□□□□ 0.67
LNX1Q8TBB1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
LNX1Q8TBB1 TP73-AS1-210ENST00000637775 1455 ntBASIC19.24■□□□□ 0.67
LNX1Q8TBB1 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.24■□□□□ 0.67
LNX1Q8TBB1 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LNX1Q8TBB1 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LNX1Q8TBB1 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
LNX1Q8TBB1 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LNX1Q8TBB1 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.24■□□□□ 0.67
LNX1Q8TBB1 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LNX1Q8TBB1 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.24■□□□□ 0.67
LNX1Q8TBB1 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.24■□□□□ 0.67
LNX1Q8TBB1 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.24■□□□□ 0.67
LNX1Q8TBB1 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.24■□□□□ 0.67
LNX1Q8TBB1 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.24■□□□□ 0.67
LNX1Q8TBB1 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LNX1Q8TBB1 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.24■□□□□ 0.67
LNX1Q8TBB1 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.24■□□□□ 0.67
LNX1Q8TBB1 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.24■□□□□ 0.67
LNX1Q8TBB1 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.24■□□□□ 0.67
LNX1Q8TBB1 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.24■□□□□ 0.67
LNX1Q8TBB1 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LNX1Q8TBB1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LNX1Q8TBB1 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
LNX1Q8TBB1 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms