Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 AC022898.2-201ENST00000616822 1312 ntBASIC18.21■□□□□ 0.51
PAF1Q8N7H5 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PAF1Q8N7H5 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PAF1Q8N7H5 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.2■□□□□ 0.5
PAF1Q8N7H5 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.2■□□□□ 0.5
PAF1Q8N7H5 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PAF1Q8N7H5 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PAF1Q8N7H5 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.2■□□□□ 0.5
PAF1Q8N7H5 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PAF1Q8N7H5 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.2■□□□□ 0.5
PAF1Q8N7H5 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.2■□□□□ 0.5
PAF1Q8N7H5 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
PAF1Q8N7H5 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PAF1Q8N7H5 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PAF1Q8N7H5 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.2■□□□□ 0.5
PAF1Q8N7H5 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PAF1Q8N7H5 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PAF1Q8N7H5 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.2■□□□□ 0.5
PAF1Q8N7H5 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.2■□□□□ 0.5
PAF1Q8N7H5 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.2■□□□□ 0.5
PAF1Q8N7H5 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.2■□□□□ 0.5
PAF1Q8N7H5 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PAF1Q8N7H5 AC009154.2-201ENST00000621177 724 ntBASIC18.2■□□□□ 0.5
PAF1Q8N7H5 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.2■□□□□ 0.5
PAF1Q8N7H5 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PAF1Q8N7H5 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.2■□□□□ 0.5
PAF1Q8N7H5 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PAF1Q8N7H5 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC18.2■□□□□ 0.5
PAF1Q8N7H5 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PAF1Q8N7H5 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
PAF1Q8N7H5 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC18.2■□□□□ 0.5
PAF1Q8N7H5 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PAF1Q8N7H5 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
PAF1Q8N7H5 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PAF1Q8N7H5 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PAF1Q8N7H5 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PAF1Q8N7H5 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PAF1Q8N7H5 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PAF1Q8N7H5 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.19■□□□□ 0.5
PAF1Q8N7H5 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.19■□□□□ 0.5
PAF1Q8N7H5 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PAF1Q8N7H5 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
PAF1Q8N7H5 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.19■□□□□ 0.5
PAF1Q8N7H5 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PAF1Q8N7H5 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PAF1Q8N7H5 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PAF1Q8N7H5 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
PAF1Q8N7H5 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PAF1Q8N7H5 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.19■□□□□ 0.5
PAF1Q8N7H5 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PAF1Q8N7H5 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.19■□□□□ 0.5
PAF1Q8N7H5 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PAF1Q8N7H5 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.19■□□□□ 0.5
PAF1Q8N7H5 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.19■□□□□ 0.5
PAF1Q8N7H5 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PAF1Q8N7H5 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.19■□□□□ 0.5
PAF1Q8N7H5 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PAF1Q8N7H5 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PAF1Q8N7H5 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PAF1Q8N7H5 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.19■□□□□ 0.5
PAF1Q8N7H5 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
PAF1Q8N7H5 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PAF1Q8N7H5 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PAF1Q8N7H5 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PAF1Q8N7H5 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.18■□□□□ 0.5
PAF1Q8N7H5 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PAF1Q8N7H5 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PAF1Q8N7H5 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.18■□□□□ 0.5
PAF1Q8N7H5 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.18■□□□□ 0.5
PAF1Q8N7H5 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PAF1Q8N7H5 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PAF1Q8N7H5 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PAF1Q8N7H5 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PAF1Q8N7H5 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PAF1Q8N7H5 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PAF1Q8N7H5 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PAF1Q8N7H5 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PAF1Q8N7H5 KRT18P65-201ENST00000439811 1286 ntBASIC18.18■□□□□ 0.5
PAF1Q8N7H5 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.18■□□□□ 0.5
PAF1Q8N7H5 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.18■□□□□ 0.5
PAF1Q8N7H5 TOB2P1-201ENST00000469761 992 ntBASIC18.18■□□□□ 0.5
PAF1Q8N7H5 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.18■□□□□ 0.5
PAF1Q8N7H5 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PAF1Q8N7H5 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.18■□□□□ 0.5
PAF1Q8N7H5 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.18■□□□□ 0.5
PAF1Q8N7H5 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PAF1Q8N7H5 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PAF1Q8N7H5 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PAF1Q8N7H5 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PAF1Q8N7H5 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PAF1Q8N7H5 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PAF1Q8N7H5 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PAF1Q8N7H5 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PAF1Q8N7H5 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.17■□□□□ 0.5
PAF1Q8N7H5 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PAF1Q8N7H5 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PAF1Q8N7H5 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PAF1Q8N7H5 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.17■□□□□ 0.5
PAF1Q8N7H5 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms