Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 RCN1P2-201ENST00000398357 915 ntBASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 FAAHP1-202ENST00000446499 1238 ntBASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 AC008764.6-201ENST00000595909 2069 ntBASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 AC012313.1-201ENST00000593393 3059 ntBASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH20Q8N6Y1 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH20Q8N6Y1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.08■□□□□ 0.49
PCDH20Q8N6Y1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.08■□□□□ 0.49
PCDH20Q8N6Y1 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.08■□□□□ 0.49
PCDH20Q8N6Y1 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH20Q8N6Y1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH20Q8N6Y1 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH20Q8N6Y1 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
PCDH20Q8N6Y1 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.08■□□□□ 0.49
PCDH20Q8N6Y1 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH20Q8N6Y1 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.08■□□□□ 0.49
PCDH20Q8N6Y1 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH20Q8N6Y1 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDH20Q8N6Y1 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDH20Q8N6Y1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDH20Q8N6Y1 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.08■□□□□ 0.48
PCDH20Q8N6Y1 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
PCDH20Q8N6Y1 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.08■□□□□ 0.48
PCDH20Q8N6Y1 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH20Q8N6Y1 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.08■□□□□ 0.48
PCDH20Q8N6Y1 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDH20Q8N6Y1 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH20Q8N6Y1 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.48
PCDH20Q8N6Y1 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH20Q8N6Y1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH20Q8N6Y1 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PCDH20Q8N6Y1 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH20Q8N6Y1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDH20Q8N6Y1 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH20Q8N6Y1 FLJ13224-201ENST00000313737 1514 ntBASIC18.08■□□□□ 0.48
PCDH20Q8N6Y1 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH20Q8N6Y1 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH20Q8N6Y1 INTS4P1-201ENST00000438455 1935 ntBASIC18.08■□□□□ 0.48
PCDH20Q8N6Y1 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH20Q8N6Y1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH20Q8N6Y1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH20Q8N6Y1 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH20Q8N6Y1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH20Q8N6Y1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH20Q8N6Y1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDH20Q8N6Y1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDH20Q8N6Y1 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDH20Q8N6Y1 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH20Q8N6Y1 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH20Q8N6Y1 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH20Q8N6Y1 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDH20Q8N6Y1 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH20Q8N6Y1 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH20Q8N6Y1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH20Q8N6Y1 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDH20Q8N6Y1 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH20Q8N6Y1 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.07■□□□□ 0.48
PCDH20Q8N6Y1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDH20Q8N6Y1 AL121894.2-201ENST00000602977 491 ntBASIC18.07■□□□□ 0.48
PCDH20Q8N6Y1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
PCDH20Q8N6Y1 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PCDH20Q8N6Y1 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDH20Q8N6Y1 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH20Q8N6Y1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH20Q8N6Y1 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH20Q8N6Y1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH20Q8N6Y1 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH20Q8N6Y1 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH20Q8N6Y1 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms