Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TTC39CQ8N584 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TTC39CQ8N584 AL353593.2-201ENST00000602529 1483 ntBASIC18.8■□□□□ 0.6
TTC39CQ8N584 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TTC39CQ8N584 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TTC39CQ8N584 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.8■□□□□ 0.6
TTC39CQ8N584 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.8■□□□□ 0.6
TTC39CQ8N584 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.8■□□□□ 0.6
TTC39CQ8N584 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.8■□□□□ 0.6
TTC39CQ8N584 KRT18P31-201ENST00000506277 1292 ntBASIC18.8■□□□□ 0.6
TTC39CQ8N584 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.8■□□□□ 0.6
TTC39CQ8N584 AC091304.2-201ENST00000564639 760 ntBASIC18.8■□□□□ 0.6
TTC39CQ8N584 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.8■□□□□ 0.6
TTC39CQ8N584 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.8■□□□□ 0.6
TTC39CQ8N584 CLEC4GP1-201ENST00000596555 870 ntBASIC18.8■□□□□ 0.6
TTC39CQ8N584 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TTC39CQ8N584 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.8■□□□□ 0.6
TTC39CQ8N584 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.8■□□□□ 0.6
TTC39CQ8N584 AD001527.2-201ENST00000622994 785 ntBASIC18.8■□□□□ 0.6
TTC39CQ8N584 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TTC39CQ8N584 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TTC39CQ8N584 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TTC39CQ8N584 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TTC39CQ8N584 AL049757.1-201ENST00000616842 1596 ntBASIC18.8■□□□□ 0.6
TTC39CQ8N584 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.8■□□□□ 0.6
TTC39CQ8N584 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TTC39CQ8N584 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TTC39CQ8N584 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TTC39CQ8N584 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.79■□□□□ 0.6
TTC39CQ8N584 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TTC39CQ8N584 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.79■□□□□ 0.6
TTC39CQ8N584 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TTC39CQ8N584 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TTC39CQ8N584 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TTC39CQ8N584 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TTC39CQ8N584 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.79■□□□□ 0.6
TTC39CQ8N584 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
TTC39CQ8N584 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TTC39CQ8N584 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.79■□□□□ 0.6
TTC39CQ8N584 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TTC39CQ8N584 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TTC39CQ8N584 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TTC39CQ8N584 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.79■□□□□ 0.6
TTC39CQ8N584 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.79■□□□□ 0.6
TTC39CQ8N584 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.79■□□□□ 0.6
TTC39CQ8N584 AC026471.1-201ENST00000564629 3026 ntBASIC18.79■□□□□ 0.6
TTC39CQ8N584 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TTC39CQ8N584 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TTC39CQ8N584 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TTC39CQ8N584 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TTC39CQ8N584 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.79■□□□□ 0.6
TTC39CQ8N584 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TTC39CQ8N584 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TTC39CQ8N584 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC39CQ8N584 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC39CQ8N584 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TTC39CQ8N584 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.78■□□□□ 0.6
TTC39CQ8N584 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TTC39CQ8N584 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TTC39CQ8N584 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC39CQ8N584 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TTC39CQ8N584 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TTC39CQ8N584 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.78■□□□□ 0.6
TTC39CQ8N584 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.78■□□□□ 0.6
TTC39CQ8N584 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.78■□□□□ 0.6
TTC39CQ8N584 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC39CQ8N584 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TTC39CQ8N584 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.78■□□□□ 0.6
TTC39CQ8N584 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TTC39CQ8N584 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.78■□□□□ 0.6
TTC39CQ8N584 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.78■□□□□ 0.6
TTC39CQ8N584 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TTC39CQ8N584 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.78■□□□□ 0.6
TTC39CQ8N584 ABCD1P5-201ENST00000445663 754 ntBASIC18.78■□□□□ 0.6
TTC39CQ8N584 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.78■□□□□ 0.6
TTC39CQ8N584 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC39CQ8N584 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.78■□□□□ 0.6
TTC39CQ8N584 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.78■□□□□ 0.6
TTC39CQ8N584 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.78■□□□□ 0.6
TTC39CQ8N584 AC109462.3-201ENST00000573934 613 ntBASIC18.78■□□□□ 0.6
TTC39CQ8N584 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.78■□□□□ 0.6
TTC39CQ8N584 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC39CQ8N584 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC39CQ8N584 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TTC39CQ8N584 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.78■□□□□ 0.6
TTC39CQ8N584 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.78■□□□□ 0.6
TTC39CQ8N584 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TTC39CQ8N584 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TTC39CQ8N584 AL355312.1-201ENST00000407115 2176 ntBASIC18.78■□□□□ 0.6
TTC39CQ8N584 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.78■□□□□ 0.6
TTC39CQ8N584 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC39CQ8N584 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC39CQ8N584 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC39CQ8N584 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TTC39CQ8N584 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.77■□□□□ 0.6
TTC39CQ8N584 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TTC39CQ8N584 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.77■□□□□ 0.6
TTC39CQ8N584 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.77■□□□□ 0.6
TTC39CQ8N584 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.77■□□□□ 0.6
TTC39CQ8N584 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms