Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC22.4■■□□□ 1.18
PROM2Q8N271 AC140878.1-201ENST00000565277 250 ntBASIC22.4■■□□□ 1.18
PROM2Q8N271 SPDYE9P-201ENST00000570642 692 ntBASIC22.4■■□□□ 1.18
PROM2Q8N271 SPDYE22P-201ENST00000582158 798 ntBASIC22.4■■□□□ 1.18
PROM2Q8N271 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
PROM2Q8N271 SPDYE10P-202ENST00000612005 668 ntBASIC22.4■■□□□ 1.18
PROM2Q8N271 SPDYE8P-202ENST00000612377 668 ntBASIC22.4■■□□□ 1.18
PROM2Q8N271 AL390754.1-201ENST00000619088 582 ntBASIC22.4■■□□□ 1.18
PROM2Q8N271 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC22.4■■□□□ 1.18
PROM2Q8N271 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PROM2Q8N271 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
PROM2Q8N271 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PROM2Q8N271 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PROM2Q8N271 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC22.39■■□□□ 1.18
PROM2Q8N271 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.18
PROM2Q8N271 AC008677.1-201ENST00000519230 1561 ntBASIC22.39■■□□□ 1.18
PROM2Q8N271 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PROM2Q8N271 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PROM2Q8N271 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC22.39■■□□□ 1.17
PROM2Q8N271 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC22.39■■□□□ 1.17
PROM2Q8N271 FAM86C2P-203ENST00000528684 1004 ntBASIC22.39■■□□□ 1.17
PROM2Q8N271 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC22.39■■□□□ 1.17
PROM2Q8N271 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC22.39■■□□□ 1.17
PROM2Q8N271 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PROM2Q8N271 TMED1-207ENST00000591695 809 ntTSL 5 BASIC22.39■■□□□ 1.17
PROM2Q8N271 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC22.39■■□□□ 1.17
PROM2Q8N271 RAB34-224ENST00000636513 888 ntTSL 5 BASIC22.39■■□□□ 1.17
PROM2Q8N271 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PROM2Q8N271 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PROM2Q8N271 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PROM2Q8N271 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PROM2Q8N271 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PROM2Q8N271 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC22.39■■□□□ 1.17
PROM2Q8N271 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
PROM2Q8N271 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
PROM2Q8N271 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.38■■□□□ 1.17
PROM2Q8N271 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PROM2Q8N271 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC22.38■■□□□ 1.17
PROM2Q8N271 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PROM2Q8N271 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PROM2Q8N271 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PROM2Q8N271 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PROM2Q8N271 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
PROM2Q8N271 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PROM2Q8N271 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
PROM2Q8N271 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
PROM2Q8N271 COX5BP8-201ENST00000416911 349 ntBASIC22.38■■□□□ 1.17
PROM2Q8N271 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC22.38■■□□□ 1.17
PROM2Q8N271 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
PROM2Q8N271 STK19B-204ENST00000512515 211 ntBASIC22.38■■□□□ 1.17
PROM2Q8N271 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PROM2Q8N271 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC22.38■■□□□ 1.17
PROM2Q8N271 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PROM2Q8N271 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PROM2Q8N271 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PROM2Q8N271 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC22.38■■□□□ 1.17
PROM2Q8N271 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PROM2Q8N271 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PROM2Q8N271 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC22.38■■□□□ 1.17
PROM2Q8N271 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PROM2Q8N271 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
PROM2Q8N271 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC22.37■■□□□ 1.17
PROM2Q8N271 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PROM2Q8N271 AL590787.1-201ENST00000568856 1315 ntBASIC22.37■■□□□ 1.17
PROM2Q8N271 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
PROM2Q8N271 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
PROM2Q8N271 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
PROM2Q8N271 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC22.37■■□□□ 1.17
PROM2Q8N271 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC22.37■■□□□ 1.17
PROM2Q8N271 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC22.37■■□□□ 1.17
PROM2Q8N271 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PROM2Q8N271 INO80E-210ENST00000567705 880 ntTSL 3 BASIC22.37■■□□□ 1.17
PROM2Q8N271 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC22.37■■□□□ 1.17
PROM2Q8N271 AL662799.1-202ENST00000614205 422 ntBASIC22.37■■□□□ 1.17
PROM2Q8N271 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC22.37■■□□□ 1.17
PROM2Q8N271 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
PROM2Q8N271 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
PROM2Q8N271 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC22.37■■□□□ 1.17
PROM2Q8N271 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC22.37■■□□□ 1.17
PROM2Q8N271 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
PROM2Q8N271 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PROM2Q8N271 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
PROM2Q8N271 ADM-207ENST00000530439 1839 ntTSL 2 BASIC22.36■■□□□ 1.17
PROM2Q8N271 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PROM2Q8N271 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
PROM2Q8N271 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PROM2Q8N271 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PROM2Q8N271 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
PROM2Q8N271 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PROM2Q8N271 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC22.36■■□□□ 1.17
PROM2Q8N271 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC22.36■■□□□ 1.17
PROM2Q8N271 KRT18P32-201ENST00000424695 1287 ntBASIC22.36■■□□□ 1.17
PROM2Q8N271 AC125807.1-201ENST00000483097 614 ntBASIC22.36■■□□□ 1.17
PROM2Q8N271 AC097493.3-201ENST00000509725 367 ntBASIC22.36■■□□□ 1.17
PROM2Q8N271 DUTP2-201ENST00000519164 463 ntBASIC22.36■■□□□ 1.17
PROM2Q8N271 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC22.36■■□□□ 1.17
PROM2Q8N271 TSFM-210ENST00000550559 897 ntTSL 5 BASIC22.36■■□□□ 1.17
PROM2Q8N271 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PROM2Q8N271 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PROM2Q8N271 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms