Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.52■□□□□ 0.39
TMEFF1Q8IYR6 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
TMEFF1Q8IYR6 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.39
TMEFF1Q8IYR6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEFF1Q8IYR6 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEFF1Q8IYR6 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.51■□□□□ 0.39
TMEFF1Q8IYR6 WIZP1-201ENST00000531444 2299 ntBASIC17.51■□□□□ 0.39
TMEFF1Q8IYR6 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEFF1Q8IYR6 GPR89P-201ENST00000407924 1495 ntBASIC17.51■□□□□ 0.39
TMEFF1Q8IYR6 AL353593.2-201ENST00000602529 1483 ntBASIC17.51■□□□□ 0.39
TMEFF1Q8IYR6 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.51■□□□□ 0.39
TMEFF1Q8IYR6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEFF1Q8IYR6 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
TMEFF1Q8IYR6 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TMEFF1Q8IYR6 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEFF1Q8IYR6 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.51■□□□□ 0.39
TMEFF1Q8IYR6 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEFF1Q8IYR6 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEFF1Q8IYR6 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEFF1Q8IYR6 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEFF1Q8IYR6 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TMEFF1Q8IYR6 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEFF1Q8IYR6 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEFF1Q8IYR6 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
TMEFF1Q8IYR6 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEFF1Q8IYR6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.51■□□□□ 0.39
TMEFF1Q8IYR6 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TMEFF1Q8IYR6 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEFF1Q8IYR6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.51■□□□□ 0.39
TMEFF1Q8IYR6 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEFF1Q8IYR6 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEFF1Q8IYR6 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEFF1Q8IYR6 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TMEFF1Q8IYR6 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.51■□□□□ 0.39
TMEFF1Q8IYR6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TMEFF1Q8IYR6 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEFF1Q8IYR6 AC104581.1-202ENST00000635932 2618 ntBASIC17.51■□□□□ 0.39
TMEFF1Q8IYR6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
TMEFF1Q8IYR6 AC093010.1-201ENST00000473625 1624 ntBASIC17.5■□□□□ 0.39
TMEFF1Q8IYR6 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.5■□□□□ 0.39
TMEFF1Q8IYR6 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
TMEFF1Q8IYR6 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMEFF1Q8IYR6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEFF1Q8IYR6 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMEFF1Q8IYR6 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.5■□□□□ 0.39
TMEFF1Q8IYR6 AL049757.1-201ENST00000616842 1596 ntBASIC17.5■□□□□ 0.39
TMEFF1Q8IYR6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEFF1Q8IYR6 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEFF1Q8IYR6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEFF1Q8IYR6 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEFF1Q8IYR6 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEFF1Q8IYR6 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.5■□□□□ 0.39
TMEFF1Q8IYR6 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
TMEFF1Q8IYR6 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.5■□□□□ 0.39
TMEFF1Q8IYR6 CEND1P1-201ENST00000451006 455 ntBASIC17.5■□□□□ 0.39
TMEFF1Q8IYR6 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TMEFF1Q8IYR6 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.5■□□□□ 0.39
TMEFF1Q8IYR6 IGHV3-65-201ENST00000523210 341 ntBASIC17.5■□□□□ 0.39
TMEFF1Q8IYR6 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.5■□□□□ 0.39
TMEFF1Q8IYR6 AC008667.4-201ENST00000607370 168 ntBASIC17.5■□□□□ 0.39
TMEFF1Q8IYR6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEFF1Q8IYR6 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TMEFF1Q8IYR6 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEFF1Q8IYR6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEFF1Q8IYR6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMEFF1Q8IYR6 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEFF1Q8IYR6 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.5■□□□□ 0.39
TMEFF1Q8IYR6 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEFF1Q8IYR6 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEFF1Q8IYR6 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.5■□□□□ 0.39
TMEFF1Q8IYR6 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEFF1Q8IYR6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TMEFF1Q8IYR6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.49■□□□□ 0.39
TMEFF1Q8IYR6 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEFF1Q8IYR6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TMEFF1Q8IYR6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.49■□□□□ 0.39
TMEFF1Q8IYR6 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TMEFF1Q8IYR6 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEFF1Q8IYR6 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEFF1Q8IYR6 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEFF1Q8IYR6 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.49■□□□□ 0.39
TMEFF1Q8IYR6 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEFF1Q8IYR6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.49■□□□□ 0.39
TMEFF1Q8IYR6 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.49■□□□□ 0.39
TMEFF1Q8IYR6 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TMEFF1Q8IYR6 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TMEFF1Q8IYR6 KLF4P1-201ENST00000412782 1185 ntBASIC17.49■□□□□ 0.39
TMEFF1Q8IYR6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.49■□□□□ 0.39
TMEFF1Q8IYR6 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TMEFF1Q8IYR6 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
TMEFF1Q8IYR6 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.49■□□□□ 0.39
TMEFF1Q8IYR6 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEFF1Q8IYR6 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TMEFF1Q8IYR6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TMEFF1Q8IYR6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TMEFF1Q8IYR6 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.49■□□□□ 0.39
TMEFF1Q8IYR6 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms