Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
APLFQ8IW19 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
APLFQ8IW19 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
APLFQ8IW19 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.6■□□□□ 0.41
APLFQ8IW19 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.6■□□□□ 0.41
APLFQ8IW19 AP001094.4-201ENST00000579008 2176 ntBASIC17.6■□□□□ 0.41
APLFQ8IW19 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
APLFQ8IW19 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
APLFQ8IW19 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
APLFQ8IW19 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
APLFQ8IW19 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
APLFQ8IW19 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
APLFQ8IW19 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
APLFQ8IW19 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
APLFQ8IW19 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
APLFQ8IW19 PCDHB19P-201ENST00000570871 2371 ntBASIC17.59■□□□□ 0.41
APLFQ8IW19 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
APLFQ8IW19 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
APLFQ8IW19 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
APLFQ8IW19 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
APLFQ8IW19 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
APLFQ8IW19 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
APLFQ8IW19 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
APLFQ8IW19 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
APLFQ8IW19 HBZP1-201ENST00000354915 429 ntBASIC17.59■□□□□ 0.41
APLFQ8IW19 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
APLFQ8IW19 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.59■□□□□ 0.41
APLFQ8IW19 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
APLFQ8IW19 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
APLFQ8IW19 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
APLFQ8IW19 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
APLFQ8IW19 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
APLFQ8IW19 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
APLFQ8IW19 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
APLFQ8IW19 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
APLFQ8IW19 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.59■□□□□ 0.41
APLFQ8IW19 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.59■□□□□ 0.41
APLFQ8IW19 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
APLFQ8IW19 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
APLFQ8IW19 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.59■□□□□ 0.41
APLFQ8IW19 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
APLFQ8IW19 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.41
APLFQ8IW19 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.58■□□□□ 0.41
APLFQ8IW19 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
APLFQ8IW19 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.58■□□□□ 0.41
APLFQ8IW19 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
APLFQ8IW19 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.58■□□□□ 0.41
APLFQ8IW19 DOC2GP-204ENST00000639052 2548 ntBASIC17.58■□□□□ 0.41
APLFQ8IW19 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
APLFQ8IW19 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
APLFQ8IW19 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
APLFQ8IW19 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.58■□□□□ 0.4
APLFQ8IW19 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
APLFQ8IW19 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
APLFQ8IW19 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.58■□□□□ 0.4
APLFQ8IW19 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
APLFQ8IW19 SPDYE13P-201ENST00000445314 798 ntBASIC17.58■□□□□ 0.4
APLFQ8IW19 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
APLFQ8IW19 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.58■□□□□ 0.4
APLFQ8IW19 NPAP1P7-201ENST00000613027 823 ntBASIC17.58■□□□□ 0.4
APLFQ8IW19 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.58■□□□□ 0.4
APLFQ8IW19 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.58■□□□□ 0.4
APLFQ8IW19 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
APLFQ8IW19 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.58■□□□□ 0.4
APLFQ8IW19 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
APLFQ8IW19 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
APLFQ8IW19 PCDH8P1-201ENST00000428983 2773 ntBASIC17.58■□□□□ 0.4
APLFQ8IW19 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
APLFQ8IW19 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
APLFQ8IW19 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
APLFQ8IW19 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.58■□□□□ 0.4
APLFQ8IW19 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
APLFQ8IW19 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.58■□□□□ 0.4
APLFQ8IW19 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
APLFQ8IW19 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.58■□□□□ 0.4
APLFQ8IW19 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
APLFQ8IW19 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
APLFQ8IW19 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.58■□□□□ 0.4
APLFQ8IW19 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.58■□□□□ 0.4
APLFQ8IW19 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.58■□□□□ 0.4
APLFQ8IW19 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.58■□□□□ 0.4
APLFQ8IW19 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
APLFQ8IW19 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
APLFQ8IW19 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
APLFQ8IW19 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
APLFQ8IW19 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
APLFQ8IW19 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.57■□□□□ 0.4
APLFQ8IW19 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
APLFQ8IW19 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
APLFQ8IW19 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
APLFQ8IW19 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
APLFQ8IW19 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
APLFQ8IW19 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.57■□□□□ 0.4
APLFQ8IW19 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
APLFQ8IW19 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
APLFQ8IW19 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
APLFQ8IW19 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.57■□□□□ 0.4
APLFQ8IW19 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
APLFQ8IW19 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
APLFQ8IW19 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms