Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 AC006015.1-201ENST00000429970 570 ntBASIC16.07■□□□□ 0.16
CROCCP3Q8IVE0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.07■□□□□ 0.16
CROCCP3Q8IVE0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CROCCP3Q8IVE0 HLA-A-209ENST00000638375 975 ntBASIC16.07■□□□□ 0.16
CROCCP3Q8IVE0 HTR7P1-201ENST00000538670 1336 ntBASIC16.07■□□□□ 0.16
CROCCP3Q8IVE0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CROCCP3Q8IVE0 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CROCCP3Q8IVE0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CROCCP3Q8IVE0 KRT8P41-201ENST00000533985 1514 ntBASIC16.07■□□□□ 0.16
CROCCP3Q8IVE0 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CROCCP3Q8IVE0 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CROCCP3Q8IVE0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CROCCP3Q8IVE0 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CROCCP3Q8IVE0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CROCCP3Q8IVE0 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
CROCCP3Q8IVE0 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CROCCP3Q8IVE0 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CROCCP3Q8IVE0 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CROCCP3Q8IVE0 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CROCCP3Q8IVE0 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CROCCP3Q8IVE0 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CROCCP3Q8IVE0 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CROCCP3Q8IVE0 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.07■□□□□ 0.16
CROCCP3Q8IVE0 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
CROCCP3Q8IVE0 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.06■□□□□ 0.16
CROCCP3Q8IVE0 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CROCCP3Q8IVE0 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CROCCP3Q8IVE0 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CROCCP3Q8IVE0 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CROCCP3Q8IVE0 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.06■□□□□ 0.16
CROCCP3Q8IVE0 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.06■□□□□ 0.16
CROCCP3Q8IVE0 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CROCCP3Q8IVE0 AC068587.6-202ENST00000641839 5619 ntBASIC16.06■□□□□ 0.16
CROCCP3Q8IVE0 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.06■□□□□ 0.16
CROCCP3Q8IVE0 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.06■□□□□ 0.16
CROCCP3Q8IVE0 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CROCCP3Q8IVE0 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CROCCP3Q8IVE0 AP000593.1-201ENST00000393668 712 ntBASIC16.06■□□□□ 0.16
CROCCP3Q8IVE0 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CROCCP3Q8IVE0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.06■□□□□ 0.16
CROCCP3Q8IVE0 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.06■□□□□ 0.16
CROCCP3Q8IVE0 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.06■□□□□ 0.16
CROCCP3Q8IVE0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.06■□□□□ 0.16
CROCCP3Q8IVE0 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CROCCP3Q8IVE0 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.06■□□□□ 0.16
CROCCP3Q8IVE0 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CROCCP3Q8IVE0 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.06■□□□□ 0.16
CROCCP3Q8IVE0 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CROCCP3Q8IVE0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CROCCP3Q8IVE0 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.06■□□□□ 0.16
CROCCP3Q8IVE0 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CROCCP3Q8IVE0 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CROCCP3Q8IVE0 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CROCCP3Q8IVE0 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
CROCCP3Q8IVE0 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CROCCP3Q8IVE0 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CROCCP3Q8IVE0 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CROCCP3Q8IVE0 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CROCCP3Q8IVE0 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CROCCP3Q8IVE0 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CROCCP3Q8IVE0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.05■□□□□ 0.16
CROCCP3Q8IVE0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CROCCP3Q8IVE0 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.05■□□□□ 0.16
CROCCP3Q8IVE0 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CROCCP3Q8IVE0 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.05■□□□□ 0.16
CROCCP3Q8IVE0 DBET-201ENST00000630918 3363 ntBASIC16.05■□□□□ 0.16
CROCCP3Q8IVE0 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CROCCP3Q8IVE0 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CROCCP3Q8IVE0 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CROCCP3Q8IVE0 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
CROCCP3Q8IVE0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CROCCP3Q8IVE0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CROCCP3Q8IVE0 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CROCCP3Q8IVE0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC16.05■□□□□ 0.16
CROCCP3Q8IVE0 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CROCCP3Q8IVE0 BX276092.2-201ENST00000417668 665 ntBASIC16.05■□□□□ 0.16
CROCCP3Q8IVE0 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.05■□□□□ 0.16
CROCCP3Q8IVE0 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.05■□□□□ 0.16
CROCCP3Q8IVE0 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.05■□□□□ 0.16
CROCCP3Q8IVE0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CROCCP3Q8IVE0 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CROCCP3Q8IVE0 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CROCCP3Q8IVE0 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CROCCP3Q8IVE0 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.05■□□□□ 0.16
CROCCP3Q8IVE0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CROCCP3Q8IVE0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CROCCP3Q8IVE0 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CROCCP3Q8IVE0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.05■□□□□ 0.16
CROCCP3Q8IVE0 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms