Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB11FIP4Q86YS3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.78■□□□□ 0.92
RAB11FIP4Q86YS3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB11FIP4Q86YS3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RAB11FIP4Q86YS3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RAB11FIP4Q86YS3 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB11FIP4Q86YS3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.78■□□□□ 0.92
RAB11FIP4Q86YS3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB11FIP4Q86YS3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RAB11FIP4Q86YS3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB11FIP4Q86YS3 NSUN5P1-202ENST00000421140 1535 ntBASIC20.78■□□□□ 0.92
RAB11FIP4Q86YS3 NSUN5P2-203ENST00000457352 1529 ntBASIC20.78■□□□□ 0.92
RAB11FIP4Q86YS3 AC125634.1-201ENST00000438758 1403 ntBASIC20.78■□□□□ 0.92
RAB11FIP4Q86YS3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
RAB11FIP4Q86YS3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAB11FIP4Q86YS3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.77■□□□□ 0.92
RAB11FIP4Q86YS3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB11FIP4Q86YS3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB11FIP4Q86YS3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB11FIP4Q86YS3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB11FIP4Q86YS3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.77■□□□□ 0.92
RAB11FIP4Q86YS3 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB11FIP4Q86YS3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB11FIP4Q86YS3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAB11FIP4Q86YS3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB11FIP4Q86YS3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.77■□□□□ 0.92
RAB11FIP4Q86YS3 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.77■□□□□ 0.92
RAB11FIP4Q86YS3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
RAB11FIP4Q86YS3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.77■□□□□ 0.92
RAB11FIP4Q86YS3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.77■□□□□ 0.92
RAB11FIP4Q86YS3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB11FIP4Q86YS3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB11FIP4Q86YS3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB11FIP4Q86YS3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.77■□□□□ 0.92
RAB11FIP4Q86YS3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.77■□□□□ 0.91
RAB11FIP4Q86YS3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RAB11FIP4Q86YS3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB11FIP4Q86YS3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.76■□□□□ 0.91
RAB11FIP4Q86YS3 AC007967.3-201ENST00000434308 558 ntBASIC20.76■□□□□ 0.91
RAB11FIP4Q86YS3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.76■□□□□ 0.91
RAB11FIP4Q86YS3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.76■□□□□ 0.91
RAB11FIP4Q86YS3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.76■□□□□ 0.91
RAB11FIP4Q86YS3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.76■□□□□ 0.91
RAB11FIP4Q86YS3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.76■□□□□ 0.91
RAB11FIP4Q86YS3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.76■□□□□ 0.91
RAB11FIP4Q86YS3 AC138894.3-201ENST00000603787 634 ntBASIC20.76■□□□□ 0.91
RAB11FIP4Q86YS3 AL138831.2-201ENST00000606564 490 ntBASIC20.76■□□□□ 0.91
RAB11FIP4Q86YS3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
RAB11FIP4Q86YS3 SIRPAP1-201ENST00000448467 1770 ntBASIC20.76■□□□□ 0.91
RAB11FIP4Q86YS3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.76■□□□□ 0.91
RAB11FIP4Q86YS3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.76■□□□□ 0.91
RAB11FIP4Q86YS3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.76■□□□□ 0.91
RAB11FIP4Q86YS3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB11FIP4Q86YS3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB11FIP4Q86YS3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
RAB11FIP4Q86YS3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB11FIP4Q86YS3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RAB11FIP4Q86YS3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RAB11FIP4Q86YS3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RAB11FIP4Q86YS3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RAB11FIP4Q86YS3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.75■□□□□ 0.91
RAB11FIP4Q86YS3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAB11FIP4Q86YS3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.75■□□□□ 0.91
RAB11FIP4Q86YS3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.75■□□□□ 0.91
RAB11FIP4Q86YS3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB11FIP4Q86YS3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAB11FIP4Q86YS3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.75■□□□□ 0.91
RAB11FIP4Q86YS3 IGHV3-47-201ENST00000425060 335 ntBASIC20.75■□□□□ 0.91
RAB11FIP4Q86YS3 BNIP3P18-201ENST00000593976 575 ntBASIC20.75■□□□□ 0.91
RAB11FIP4Q86YS3 AC099336.1-202ENST00000602961 463 ntBASIC20.75■□□□□ 0.91
RAB11FIP4Q86YS3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAB11FIP4Q86YS3 AC012313.1-201ENST00000593393 3059 ntBASIC20.75■□□□□ 0.91
RAB11FIP4Q86YS3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.75■□□□□ 0.91
RAB11FIP4Q86YS3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.75■□□□□ 0.91
RAB11FIP4Q86YS3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RAB11FIP4Q86YS3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAB11FIP4Q86YS3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB11FIP4Q86YS3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RAB11FIP4Q86YS3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAB11FIP4Q86YS3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB11FIP4Q86YS3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.74■□□□□ 0.91
RAB11FIP4Q86YS3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB11FIP4Q86YS3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RAB11FIP4Q86YS3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAB11FIP4Q86YS3 MINOS1P3-201ENST00000457048 203 ntBASIC20.74■□□□□ 0.91
RAB11FIP4Q86YS3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.74■□□□□ 0.91
RAB11FIP4Q86YS3 AC096582.2-201ENST00000510860 516 ntBASIC20.74■□□□□ 0.91
RAB11FIP4Q86YS3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.74■□□□□ 0.91
RAB11FIP4Q86YS3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
RAB11FIP4Q86YS3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.74■□□□□ 0.91
RAB11FIP4Q86YS3 Z69720.1-201ENST00000601483 472 ntBASIC20.74■□□□□ 0.91
RAB11FIP4Q86YS3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.74■□□□□ 0.91
RAB11FIP4Q86YS3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.74■□□□□ 0.91
RAB11FIP4Q86YS3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.74■□□□□ 0.91
RAB11FIP4Q86YS3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
RAB11FIP4Q86YS3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB11FIP4Q86YS3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAB11FIP4Q86YS3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RAB11FIP4Q86YS3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.74■□□□□ 0.91
RAB11FIP4Q86YS3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms