Protein–RNA interactions for Protein: Q7Z2R9

SSBP3-AS1, Putative uncharacterized protein SSBP3-AS1, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-AS1Q7Z2R9 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.72
SSBP3-AS1Q7Z2R9 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
SSBP3-AS1Q7Z2R9 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
SSBP3-AS1Q7Z2R9 EML3-217ENST00000531557 2509 ntTSL 5 BASIC10.52□□□□□ -0.72
SSBP3-AS1Q7Z2R9 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
SSBP3-AS1Q7Z2R9 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
SSBP3-AS1Q7Z2R9 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
SSBP3-AS1Q7Z2R9 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 AC112907.2-201ENST00000448639 330 ntBASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 AC112698.1-201ENST00000510299 916 ntBASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 GUSBP12-201ENST00000513727 720 ntBASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 LTBR-211ENST00000543190 785 ntTSL 3 BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 MED29-202ENST00000594368 1471 ntTSL 2 BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 AC133963.1-201ENST00000504166 1679 ntBASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 AC097374.2-201ENST00000618617 1306 ntBASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SSBP3-AS1Q7Z2R9 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 MTCL1P1-201ENST00000446207 792 ntBASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 AC092597.1-201ENST00000487352 616 ntBASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 AC063952.2-201ENST00000498792 1227 ntBASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 TBC1D3P5-201ENST00000579401 1545 ntBASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SSBP3-AS1Q7Z2R9 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
SSBP3-AS1Q7Z2R9 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SSBP3-AS1Q7Z2R9 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms