Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
USP50Q70EL3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
USP50Q70EL3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP50Q70EL3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP50Q70EL3 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP50Q70EL3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
USP50Q70EL3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP50Q70EL3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
USP50Q70EL3 CLDN5-201ENST00000403084 2357 ntBASIC20.71■□□□□ 0.91
USP50Q70EL3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
USP50Q70EL3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.71■□□□□ 0.91
USP50Q70EL3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP50Q70EL3 OR8S1-201ENST00000310194 1080 ntBASIC20.71■□□□□ 0.91
USP50Q70EL3 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP50Q70EL3 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.71■□□□□ 0.91
USP50Q70EL3 MEIS3P1-201ENST00000495167 958 ntBASIC20.71■□□□□ 0.91
USP50Q70EL3 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC20.71■□□□□ 0.91
USP50Q70EL3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC20.71■□□□□ 0.91
USP50Q70EL3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP50Q70EL3 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC20.71■□□□□ 0.91
USP50Q70EL3 AC116407.2-201ENST00000613639 860 ntBASIC20.71■□□□□ 0.91
USP50Q70EL3 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC20.71■□□□□ 0.91
USP50Q70EL3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.71■□□□□ 0.91
USP50Q70EL3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.71■□□□□ 0.91
USP50Q70EL3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP50Q70EL3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP50Q70EL3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP50Q70EL3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.71■□□□□ 0.91
USP50Q70EL3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
USP50Q70EL3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
USP50Q70EL3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.7■□□□□ 0.9
USP50Q70EL3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP50Q70EL3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP50Q70EL3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP50Q70EL3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP50Q70EL3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP50Q70EL3 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC20.7■□□□□ 0.9
USP50Q70EL3 HLA-V-201ENST00000429037 534 ntBASIC20.7■□□□□ 0.9
USP50Q70EL3 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC20.7■□□□□ 0.9
USP50Q70EL3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.7■□□□□ 0.9
USP50Q70EL3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC20.7■□□□□ 0.9
USP50Q70EL3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC20.7■□□□□ 0.9
USP50Q70EL3 AL359881.2-201ENST00000602973 570 ntBASIC20.7■□□□□ 0.9
USP50Q70EL3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP50Q70EL3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
USP50Q70EL3 AC129492.6-201ENST00000611383 1305 ntBASIC20.7■□□□□ 0.9
USP50Q70EL3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
USP50Q70EL3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP50Q70EL3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP50Q70EL3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC20.7■□□□□ 0.9
USP50Q70EL3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP50Q70EL3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP50Q70EL3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP50Q70EL3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP50Q70EL3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP50Q70EL3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP50Q70EL3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP50Q70EL3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
USP50Q70EL3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP50Q70EL3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP50Q70EL3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP50Q70EL3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.69■□□□□ 0.9
USP50Q70EL3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP50Q70EL3 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP50Q70EL3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP50Q70EL3 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
USP50Q70EL3 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
USP50Q70EL3 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC20.69■□□□□ 0.9
USP50Q70EL3 TREML5P-201ENST00000421694 576 ntBASIC20.69■□□□□ 0.9
USP50Q70EL3 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC20.69■□□□□ 0.9
USP50Q70EL3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC20.69■□□□□ 0.9
USP50Q70EL3 RBPMS2P1-201ENST00000437762 623 ntBASIC20.69■□□□□ 0.9
USP50Q70EL3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.69■□□□□ 0.9
USP50Q70EL3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.69■□□□□ 0.9
USP50Q70EL3 AC002558.1-201ENST00000488906 803 ntBASIC20.69■□□□□ 0.9
USP50Q70EL3 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC20.69■□□□□ 0.9
USP50Q70EL3 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC20.69■□□□□ 0.9
USP50Q70EL3 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC20.69■□□□□ 0.9
USP50Q70EL3 AC027307.3-201ENST00000594262 1100 ntBASIC20.69■□□□□ 0.9
USP50Q70EL3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP50Q70EL3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP50Q70EL3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP50Q70EL3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
USP50Q70EL3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP50Q70EL3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP50Q70EL3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.69■□□□□ 0.9
USP50Q70EL3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP50Q70EL3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP50Q70EL3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.69■□□□□ 0.9
USP50Q70EL3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.68■□□□□ 0.9
USP50Q70EL3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP50Q70EL3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP50Q70EL3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP50Q70EL3 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP50Q70EL3 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP50Q70EL3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP50Q70EL3 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC20.68■□□□□ 0.9
USP50Q70EL3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP50Q70EL3 MYCLP1-201ENST00000372451 1075 ntBASIC20.68■□□□□ 0.9
USP50Q70EL3 CRB3P1-201ENST00000449338 276 ntBASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms