Protein–RNA interactions for Protein: Q6UWI4

SHISA2, Protein shisa-2 homolog, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2Q6UWI4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 ELK2BP-201ENST00000415014 1224 ntBASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 AC093512.1-201ENST00000617969 520 ntBASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 NCF1C-201ENST00000438382 1427 ntBASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 AC004817.3-201ENST00000602957 2129 ntBASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHISA2Q6UWI4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 AR-207ENST00000612010 3896 ntTSL 5 BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 AC008894.3-201ENST00000624324 3103 ntBASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 DDX43P3-201ENST00000441064 443 ntBASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 RPS15P9-201ENST00000494093 319 ntBASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 AL031432.2-201ENST00000566714 459 ntBASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 AL928711.1-201ENST00000570165 459 ntBASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 AC010654.1-201ENST00000615722 808 ntBASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 AC073592.5-201ENST00000624854 528 ntBASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms