Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SHC4Q6S5L8 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHC4Q6S5L8 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.95■□□□□ 0.78
SHC4Q6S5L8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.95■□□□□ 0.78
SHC4Q6S5L8 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SHC4Q6S5L8 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHC4Q6S5L8 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHC4Q6S5L8 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHC4Q6S5L8 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHC4Q6S5L8 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHC4Q6S5L8 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHC4Q6S5L8 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SHC4Q6S5L8 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SHC4Q6S5L8 AL645929.1-201ENST00000420084 975 ntBASIC19.95■□□□□ 0.78
SHC4Q6S5L8 AL845331.1-201ENST00000424978 1190 ntBASIC19.95■□□□□ 0.78
SHC4Q6S5L8 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.95■□□□□ 0.78
SHC4Q6S5L8 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.95■□□□□ 0.78
SHC4Q6S5L8 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SHC4Q6S5L8 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SHC4Q6S5L8 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.95■□□□□ 0.78
SHC4Q6S5L8 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.95■□□□□ 0.78
SHC4Q6S5L8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SHC4Q6S5L8 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SHC4Q6S5L8 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SHC4Q6S5L8 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.95■□□□□ 0.78
SHC4Q6S5L8 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SHC4Q6S5L8 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
SHC4Q6S5L8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHC4Q6S5L8 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHC4Q6S5L8 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHC4Q6S5L8 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.94■□□□□ 0.78
SHC4Q6S5L8 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.94■□□□□ 0.78
SHC4Q6S5L8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHC4Q6S5L8 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SHC4Q6S5L8 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHC4Q6S5L8 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.94■□□□□ 0.78
SHC4Q6S5L8 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.94■□□□□ 0.78
SHC4Q6S5L8 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.94■□□□□ 0.78
SHC4Q6S5L8 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.94■□□□□ 0.78
SHC4Q6S5L8 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SHC4Q6S5L8 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHC4Q6S5L8 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHC4Q6S5L8 COX5BP2-201ENST00000392354 334 ntBASIC19.94■□□□□ 0.78
SHC4Q6S5L8 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHC4Q6S5L8 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.94■□□□□ 0.78
SHC4Q6S5L8 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SHC4Q6S5L8 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHC4Q6S5L8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHC4Q6S5L8 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHC4Q6S5L8 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.94■□□□□ 0.78
SHC4Q6S5L8 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.94■□□□□ 0.78
SHC4Q6S5L8 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHC4Q6S5L8 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SHC4Q6S5L8 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHC4Q6S5L8 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SHC4Q6S5L8 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHC4Q6S5L8 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.93■□□□□ 0.78
SHC4Q6S5L8 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHC4Q6S5L8 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHC4Q6S5L8 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHC4Q6S5L8 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHC4Q6S5L8 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SHC4Q6S5L8 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SHC4Q6S5L8 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHC4Q6S5L8 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SHC4Q6S5L8 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHC4Q6S5L8 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.93■□□□□ 0.78
SHC4Q6S5L8 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.93■□□□□ 0.78
SHC4Q6S5L8 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.93■□□□□ 0.78
SHC4Q6S5L8 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.93■□□□□ 0.78
SHC4Q6S5L8 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHC4Q6S5L8 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SHC4Q6S5L8 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.93■□□□□ 0.78
SHC4Q6S5L8 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.93■□□□□ 0.78
SHC4Q6S5L8 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.93■□□□□ 0.78
SHC4Q6S5L8 AL353801.3-201ENST00000609898 542 ntBASIC19.93■□□□□ 0.78
SHC4Q6S5L8 AL139327.4-201ENST00000612362 153 ntBASIC19.93■□□□□ 0.78
SHC4Q6S5L8 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHC4Q6S5L8 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHC4Q6S5L8 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SHC4Q6S5L8 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHC4Q6S5L8 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.92■□□□□ 0.78
SHC4Q6S5L8 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SHC4Q6S5L8 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SHC4Q6S5L8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SHC4Q6S5L8 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHC4Q6S5L8 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHC4Q6S5L8 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHC4Q6S5L8 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SHC4Q6S5L8 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHC4Q6S5L8 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SHC4Q6S5L8 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.92■□□□□ 0.78
SHC4Q6S5L8 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.92■□□□□ 0.78
SHC4Q6S5L8 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.92■□□□□ 0.78
SHC4Q6S5L8 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.92■□□□□ 0.78
SHC4Q6S5L8 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.92■□□□□ 0.78
SHC4Q6S5L8 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SHC4Q6S5L8 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHC4Q6S5L8 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHC4Q6S5L8 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms