Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 AP003733.1-201ENST00000491725 852 ntBASIC16.13■□□□□ 0.17
NIPAL3Q6P499 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 AC022211.2-201ENST00000585075 2527 ntBASIC16.13■□□□□ 0.17
NIPAL3Q6P499 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 CROCCP2-202ENST00000412962 2773 ntBASIC16.12■□□□□ 0.17
NIPAL3Q6P499 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 MIR1224-201ENST00000408193 85 ntBASIC16.12■□□□□ 0.17
NIPAL3Q6P499 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL3Q6P499 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NIPAL3Q6P499 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.11■□□□□ 0.17
NIPAL3Q6P499 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NIPAL3Q6P499 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NIPAL3Q6P499 KRT89P-201ENST00000620027 1478 ntBASIC16.11■□□□□ 0.17
NIPAL3Q6P499 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.11■□□□□ 0.17
NIPAL3Q6P499 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NIPAL3Q6P499 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NIPAL3Q6P499 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NIPAL3Q6P499 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NIPAL3Q6P499 MIR662-201ENST00000384847 95 ntBASIC16.11■□□□□ 0.17
NIPAL3Q6P499 AL031133.1-201ENST00000406807 723 ntBASIC16.11■□□□□ 0.17
NIPAL3Q6P499 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
NIPAL3Q6P499 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.11■□□□□ 0.17
NIPAL3Q6P499 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.11■□□□□ 0.17
NIPAL3Q6P499 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.11■□□□□ 0.17
NIPAL3Q6P499 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.11■□□□□ 0.17
NIPAL3Q6P499 AC010331.1-201ENST00000611423 582 ntBASIC16.11■□□□□ 0.17
NIPAL3Q6P499 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NIPAL3Q6P499 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms