Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF43Q68DV7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.57■□□□□ 0.56
RNF43Q68DV7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF43Q68DV7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF43Q68DV7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF43Q68DV7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF43Q68DV7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
RNF43Q68DV7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RNF43Q68DV7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF43Q68DV7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF43Q68DV7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF43Q68DV7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF43Q68DV7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF43Q68DV7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF43Q68DV7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF43Q68DV7 GMCL1P1-201ENST00000463439 1581 ntBASIC18.56■□□□□ 0.56
RNF43Q68DV7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
RNF43Q68DV7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF43Q68DV7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF43Q68DV7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF43Q68DV7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RNF43Q68DV7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF43Q68DV7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF43Q68DV7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF43Q68DV7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF43Q68DV7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
RNF43Q68DV7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF43Q68DV7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF43Q68DV7 TSPY12P-201ENST00000421279 868 ntBASIC18.56■□□□□ 0.56
RNF43Q68DV7 KRT18P65-201ENST00000439811 1286 ntBASIC18.56■□□□□ 0.56
RNF43Q68DV7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF43Q68DV7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF43Q68DV7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.56■□□□□ 0.56
RNF43Q68DV7 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF43Q68DV7 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.56■□□□□ 0.56
RNF43Q68DV7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF43Q68DV7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF43Q68DV7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF43Q68DV7 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF43Q68DV7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
RNF43Q68DV7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF43Q68DV7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF43Q68DV7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF43Q68DV7 AC138028.4-201ENST00000564984 1845 ntBASIC18.56■□□□□ 0.56
RNF43Q68DV7 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF43Q68DV7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF43Q68DV7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF43Q68DV7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF43Q68DV7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF43Q68DV7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
RNF43Q68DV7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF43Q68DV7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF43Q68DV7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RNF43Q68DV7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF43Q68DV7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF43Q68DV7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF43Q68DV7 MRPL3P1-201ENST00000400109 1033 ntBASIC18.55■□□□□ 0.56
RNF43Q68DV7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF43Q68DV7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF43Q68DV7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RNF43Q68DV7 AC104819.1-201ENST00000504587 486 ntBASIC18.55■□□□□ 0.56
RNF43Q68DV7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF43Q68DV7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF43Q68DV7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF43Q68DV7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF43Q68DV7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
RNF43Q68DV7 BX640515.1-201ENST00000617215 977 ntBASIC18.55■□□□□ 0.56
RNF43Q68DV7 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF43Q68DV7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF43Q68DV7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RNF43Q68DV7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RNF43Q68DV7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF43Q68DV7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF43Q68DV7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF43Q68DV7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF43Q68DV7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF43Q68DV7 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF43Q68DV7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF43Q68DV7 TNRC18P3-201ENST00000441896 2691 ntBASIC18.55■□□□□ 0.56
RNF43Q68DV7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF43Q68DV7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF43Q68DV7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RNF43Q68DV7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF43Q68DV7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF43Q68DV7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RNF43Q68DV7 NSUN5P1-202ENST00000421140 1535 ntBASIC18.54■□□□□ 0.56
RNF43Q68DV7 NSUN5P2-203ENST00000457352 1529 ntBASIC18.54■□□□□ 0.56
RNF43Q68DV7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RNF43Q68DV7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF43Q68DV7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF43Q68DV7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF43Q68DV7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF43Q68DV7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF43Q68DV7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF43Q68DV7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF43Q68DV7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF43Q68DV7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF43Q68DV7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF43Q68DV7 AL590627.1-203ENST00000421194 1026 ntBASIC18.54■□□□□ 0.56
RNF43Q68DV7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms