Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TTC39BQ5VTQ0 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.45■□□□□ 0.54
TTC39BQ5VTQ0 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TTC39BQ5VTQ0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.45■□□□□ 0.54
TTC39BQ5VTQ0 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TTC39BQ5VTQ0 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TTC39BQ5VTQ0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.45■□□□□ 0.54
TTC39BQ5VTQ0 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TTC39BQ5VTQ0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.45■□□□□ 0.54
TTC39BQ5VTQ0 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
TTC39BQ5VTQ0 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TTC39BQ5VTQ0 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.45■□□□□ 0.54
TTC39BQ5VTQ0 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TTC39BQ5VTQ0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.45■□□□□ 0.54
TTC39BQ5VTQ0 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TTC39BQ5VTQ0 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TTC39BQ5VTQ0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TTC39BQ5VTQ0 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TTC39BQ5VTQ0 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TTC39BQ5VTQ0 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TTC39BQ5VTQ0 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TTC39BQ5VTQ0 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
TTC39BQ5VTQ0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TTC39BQ5VTQ0 POM121L3P-201ENST00000419331 1163 ntBASIC18.45■□□□□ 0.54
TTC39BQ5VTQ0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.45■□□□□ 0.54
TTC39BQ5VTQ0 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.45■□□□□ 0.54
TTC39BQ5VTQ0 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.45■□□□□ 0.54
TTC39BQ5VTQ0 AC099336.1-202ENST00000602961 463 ntBASIC18.45■□□□□ 0.54
TTC39BQ5VTQ0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TTC39BQ5VTQ0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TTC39BQ5VTQ0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
TTC39BQ5VTQ0 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TTC39BQ5VTQ0 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TTC39BQ5VTQ0 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.45■□□□□ 0.54
TTC39BQ5VTQ0 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TTC39BQ5VTQ0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TTC39BQ5VTQ0 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TTC39BQ5VTQ0 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TTC39BQ5VTQ0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TTC39BQ5VTQ0 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.44■□□□□ 0.54
TTC39BQ5VTQ0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TTC39BQ5VTQ0 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TTC39BQ5VTQ0 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TTC39BQ5VTQ0 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TTC39BQ5VTQ0 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TTC39BQ5VTQ0 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TTC39BQ5VTQ0 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TTC39BQ5VTQ0 AC091607.1-201ENST00000490318 1060 ntBASIC18.44■□□□□ 0.54
TTC39BQ5VTQ0 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.44■□□□□ 0.54
TTC39BQ5VTQ0 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.44■□□□□ 0.54
TTC39BQ5VTQ0 KRT126P-201ENST00000549467 1181 ntBASIC18.44■□□□□ 0.54
TTC39BQ5VTQ0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.44■□□□□ 0.54
TTC39BQ5VTQ0 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.44■□□□□ 0.54
TTC39BQ5VTQ0 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.44■□□□□ 0.54
TTC39BQ5VTQ0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.44■□□□□ 0.54
TTC39BQ5VTQ0 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.44■□□□□ 0.54
TTC39BQ5VTQ0 AC005336.2-201ENST00000593183 939 ntBASIC18.44■□□□□ 0.54
TTC39BQ5VTQ0 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TTC39BQ5VTQ0 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TTC39BQ5VTQ0 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
TTC39BQ5VTQ0 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TTC39BQ5VTQ0 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.44■□□□□ 0.54
TTC39BQ5VTQ0 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TTC39BQ5VTQ0 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.44■□□□□ 0.54
TTC39BQ5VTQ0 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
TTC39BQ5VTQ0 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TTC39BQ5VTQ0 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TTC39BQ5VTQ0 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TTC39BQ5VTQ0 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TTC39BQ5VTQ0 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TTC39BQ5VTQ0 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TTC39BQ5VTQ0 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TTC39BQ5VTQ0 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TTC39BQ5VTQ0 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
TTC39BQ5VTQ0 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
TTC39BQ5VTQ0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TTC39BQ5VTQ0 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.43■□□□□ 0.54
TTC39BQ5VTQ0 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TTC39BQ5VTQ0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TTC39BQ5VTQ0 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TTC39BQ5VTQ0 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TTC39BQ5VTQ0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TTC39BQ5VTQ0 AL450487.1-201ENST00000426799 995 ntBASIC18.43■□□□□ 0.54
TTC39BQ5VTQ0 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.43■□□□□ 0.54
TTC39BQ5VTQ0 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TTC39BQ5VTQ0 AC009533.2-201ENST00000543664 586 ntBASIC18.43■□□□□ 0.54
TTC39BQ5VTQ0 AL138831.2-201ENST00000606564 490 ntBASIC18.43■□□□□ 0.54
TTC39BQ5VTQ0 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TTC39BQ5VTQ0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.43■□□□□ 0.54
TTC39BQ5VTQ0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.43■□□□□ 0.54
TTC39BQ5VTQ0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TTC39BQ5VTQ0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TTC39BQ5VTQ0 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.43■□□□□ 0.54
TTC39BQ5VTQ0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.43■□□□□ 0.54
TTC39BQ5VTQ0 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TTC39BQ5VTQ0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TTC39BQ5VTQ0 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TTC39BQ5VTQ0 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.42■□□□□ 0.54
TTC39BQ5VTQ0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TTC39BQ5VTQ0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms