Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN20Q4JDL3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN20Q4JDL3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN20Q4JDL3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN20Q4JDL3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN20Q4JDL3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN20Q4JDL3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN20Q4JDL3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PTPN20Q4JDL3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPN20Q4JDL3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN20Q4JDL3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN20Q4JDL3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPN20Q4JDL3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN20Q4JDL3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN20Q4JDL3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPN20Q4JDL3 AL138688.1-201ENST00000624851 1594 ntBASIC18.61■□□□□ 0.57
PTPN20Q4JDL3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN20Q4JDL3 TP73-AS1-210ENST00000637775 1455 ntBASIC18.61■□□□□ 0.57
PTPN20Q4JDL3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PTPN20Q4JDL3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN20Q4JDL3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN20Q4JDL3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN20Q4JDL3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN20Q4JDL3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.61■□□□□ 0.57
PTPN20Q4JDL3 AC009533.2-201ENST00000543664 586 ntBASIC18.61■□□□□ 0.57
PTPN20Q4JDL3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.61■□□□□ 0.57
PTPN20Q4JDL3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PTPN20Q4JDL3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN20Q4JDL3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PTPN20Q4JDL3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN20Q4JDL3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN20Q4JDL3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PTPN20Q4JDL3 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN20Q4JDL3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PTPN20Q4JDL3 AC141586.5-201ENST00000624546 2050 ntBASIC18.61■□□□□ 0.57
PTPN20Q4JDL3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPN20Q4JDL3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.61■□□□□ 0.57
PTPN20Q4JDL3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 FAM220CP-201ENST00000395253 831 ntBASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 AC122714.2-201ENST00000502787 707 ntBASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 AC012615.1-201ENST00000565797 1299 ntBASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.6■□□□□ 0.57
PTPN20Q4JDL3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
PTPN20Q4JDL3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.59■□□□□ 0.57
PTPN20Q4JDL3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
PTPN20Q4JDL3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PTPN20Q4JDL3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PTPN20Q4JDL3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.59■□□□□ 0.57
PTPN20Q4JDL3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN20Q4JDL3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.59■□□□□ 0.57
PTPN20Q4JDL3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PTPN20Q4JDL3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN20Q4JDL3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN20Q4JDL3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
PTPN20Q4JDL3 MINOS1P3-201ENST00000457048 203 ntBASIC18.59■□□□□ 0.57
PTPN20Q4JDL3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
PTPN20Q4JDL3 AC002558.1-201ENST00000488906 803 ntBASIC18.59■□□□□ 0.57
PTPN20Q4JDL3 AC104819.1-201ENST00000504587 486 ntBASIC18.59■□□□□ 0.57
PTPN20Q4JDL3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.59■□□□□ 0.57
PTPN20Q4JDL3 AC096582.2-201ENST00000510860 516 ntBASIC18.59■□□□□ 0.57
PTPN20Q4JDL3 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.59■□□□□ 0.57
PTPN20Q4JDL3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.59■□□□□ 0.57
PTPN20Q4JDL3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.59■□□□□ 0.57
PTPN20Q4JDL3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.59■□□□□ 0.57
PTPN20Q4JDL3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
PTPN20Q4JDL3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN20Q4JDL3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms