Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.73■□□□□ 0.59
DSC1Q08554 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DSC1Q08554 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
DSC1Q08554 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.73■□□□□ 0.59
DSC1Q08554 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.73■□□□□ 0.59
DSC1Q08554 LINC00982-205ENST00000420957 435 ntBASIC18.73■□□□□ 0.59
DSC1Q08554 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.73■□□□□ 0.59
DSC1Q08554 HCG4B-203ENST00000450128 991 ntBASIC18.73■□□□□ 0.59
DSC1Q08554 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.73■□□□□ 0.59
DSC1Q08554 AC092183.1-201ENST00000469884 875 ntBASIC18.73■□□□□ 0.59
DSC1Q08554 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.73■□□□□ 0.59
DSC1Q08554 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.73■□□□□ 0.59
DSC1Q08554 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.73■□□□□ 0.59
DSC1Q08554 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
DSC1Q08554 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.73■□□□□ 0.59
DSC1Q08554 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
DSC1Q08554 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
DSC1Q08554 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
DSC1Q08554 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.73■□□□□ 0.59
DSC1Q08554 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
DSC1Q08554 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
DSC1Q08554 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.73■□□□□ 0.59
DSC1Q08554 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DSC1Q08554 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.73■□□□□ 0.59
DSC1Q08554 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.72■□□□□ 0.59
DSC1Q08554 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DSC1Q08554 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
DSC1Q08554 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DSC1Q08554 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
DSC1Q08554 CRYGEP-201ENST00000412192 528 ntBASIC18.72■□□□□ 0.59
DSC1Q08554 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.72■□□□□ 0.59
DSC1Q08554 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.72■□□□□ 0.59
DSC1Q08554 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
DSC1Q08554 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.72■□□□□ 0.59
DSC1Q08554 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.72■□□□□ 0.59
DSC1Q08554 REXO1L11P-201ENST00000620964 1927 ntBASIC18.72■□□□□ 0.59
DSC1Q08554 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.72■□□□□ 0.59
DSC1Q08554 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DSC1Q08554 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.72■□□□□ 0.59
DSC1Q08554 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
DSC1Q08554 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.71■□□□□ 0.59
DSC1Q08554 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
DSC1Q08554 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
DSC1Q08554 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.71■□□□□ 0.59
DSC1Q08554 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.71■□□□□ 0.59
DSC1Q08554 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
DSC1Q08554 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DSC1Q08554 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DSC1Q08554 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.71■□□□□ 0.59
DSC1Q08554 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
DSC1Q08554 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DSC1Q08554 PTCHD3P3-201ENST00000403073 906 ntBASIC18.71■□□□□ 0.59
DSC1Q08554 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
DSC1Q08554 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.71■□□□□ 0.59
DSC1Q08554 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.71■□□□□ 0.59
DSC1Q08554 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
DSC1Q08554 MIR4751-201ENST00000578027 74 ntBASIC18.71■□□□□ 0.59
DSC1Q08554 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.71■□□□□ 0.59
DSC1Q08554 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.71■□□□□ 0.59
DSC1Q08554 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.71■□□□□ 0.59
DSC1Q08554 AL691403.2-201ENST00000618460 490 ntBASIC18.71■□□□□ 0.59
DSC1Q08554 AC004790.2-201ENST00000623588 572 ntBASIC18.71■□□□□ 0.59
DSC1Q08554 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.71■□□□□ 0.59
DSC1Q08554 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
DSC1Q08554 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
DSC1Q08554 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DSC1Q08554 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.71■□□□□ 0.59
DSC1Q08554 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DSC1Q08554 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.71■□□□□ 0.59
DSC1Q08554 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
DSC1Q08554 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
DSC1Q08554 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.71■□□□□ 0.59
DSC1Q08554 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.71■□□□□ 0.58
DSC1Q08554 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
DSC1Q08554 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
DSC1Q08554 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.7■□□□□ 0.58
DSC1Q08554 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
DSC1Q08554 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DSC1Q08554 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.7■□□□□ 0.58
DSC1Q08554 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DSC1Q08554 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DSC1Q08554 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
DSC1Q08554 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.7■□□□□ 0.58
DSC1Q08554 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
DSC1Q08554 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DSC1Q08554 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DSC1Q08554 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.7■□□□□ 0.58
DSC1Q08554 AP002414.1-201ENST00000391405 1147 ntBASIC18.7■□□□□ 0.58
DSC1Q08554 MCCD1P2-201ENST00000423228 335 ntBASIC18.7■□□□□ 0.58
DSC1Q08554 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.7■□□□□ 0.58
DSC1Q08554 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.7■□□□□ 0.58
DSC1Q08554 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.7■□□□□ 0.58
DSC1Q08554 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.7■□□□□ 0.58
DSC1Q08554 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.7■□□□□ 0.58
DSC1Q08554 MTDHP5-201ENST00000598980 586 ntBASIC18.7■□□□□ 0.58
DSC1Q08554 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DSC1Q08554 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DSC1Q08554 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DSC1Q08554 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DSC1Q08554 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms